RPSBLAST alignment of GI: 254781179 and protein with PDBid: 3k3p
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans} Length = 383
Score = 233 bits (596), Expect = 3e-62
Identities = 90/334 (26%), Positives = 150/334 (44%), Gaps = 42/334 (12%)
Query: 2 AVLMGGISSEREVSLSSGKACASALEDAGFKVSQIDVDRSVGLVLAH------------- 48
+L GG S+ER+VS+ S ++ A+ F V + ++ +
Sbjct: 41 VLLYGGRSAERDVSVLSAESVMRAINYDNFLVKTYFITQAGDFIKTQEFDSQPSETDKLM 100
Query: 49 -----------------LKPDLAFNVLHGNFGEDGLVQAILELLEIPYTHSGILASALSM 91
+ + F VLHG GEDG +Q LE+L++PY + IL+S+++M
Sbjct: 101 TNDTIIASQKIKPSDIYEEEAVVFPVLHGPMGEDGSIQGFLEVLKMPYVGTNILSSSVAM 160
Query: 92 DKMRSKQVVSSCGVPVCPSILVNRFTMDSQHLISP-------PYVIKPLKGGSSLGIIVI 144
DK+ + QV+ S + + + ++ P +KP GSS+GI
Sbjct: 161 DKITTNQVLESATTIPQVAYVALIEGEPLESKLAEVEEKLIYPVFVKPANMGSSVGISKA 220
Query: 145 KKDQSIPLDLLQSSSWNHGDQLLIEQYVDGIELTCGVMGDASLDVTEI--AVPKSDFYSY 202
+ L + + + ++LIEQ VD E+ G++G+ + T V FY Y
Sbjct: 221 ENRTD--LKQAIALALKYDSRVLIEQGVDAREIEVGILGNTDVKTTLPGEIVKDVAFYDY 278
Query: 203 ELKYSSLNSTHVLPAKIPLDIYKEVQRLAFLAHQAIGCRGISRSDFLFDPLSRKVFWLEI 262
E KY T +PA+I I ++++ A A + +GC G+SR DF KV+ E+
Sbjct: 279 EAKYIDNKITMAIPAEIDPVIVEKMRDYAATAFRTLGCCGLSRCDFFLTE-DGKVYLNEL 337
Query: 263 NVQPGMTPVSIFPEMAAYAGYSFRELLLWMVEDA 296
N PG T S++P + G S+ L+ +V A
Sbjct: 338 NTMPGFTQWSMYPLLWENMGLSYSVLIEELVSLA 371