Query gi|254781181|ref|YP_003065594.1| hypothetical protein CLIBASIA_05440 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 85
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 23785
Date Wed Jun 1 01:43:13 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781181.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2hyv_A Annexin A2; calcium-bin 75.3 3.5 0.00015 21.1 4.5 46 14-81 8-53 (308)
2 1w3w_A Annexin A8; coagulation 67.3 6.8 0.00029 19.5 4.4 46 14-81 27-72 (327)
3 1m9i_A Annexin VI; calcium-bin 64.1 6 0.00025 19.8 3.7 20 62-81 51-70 (672)
4 2ii2_A Alpha-11 giardin; helix 58.5 3.6 0.00015 21.0 1.7 21 61-81 33-53 (310)
5 1hm6_A Annexin 1; phospholipid 56.2 12 0.00051 18.2 4.5 46 14-81 48-93 (346)
6 1n00_A Annexin GH1; membrane-b 46.4 9.6 0.0004 18.7 2.3 46 14-81 22-67 (321)
7 1axn_A Annexin III; annexin fa 40.5 10 0.00044 18.5 1.7 46 14-81 24-69 (323)
8 2ovc_A Potassium voltage-gated 38.5 15 0.00063 17.7 2.3 17 28-44 9-25 (33)
9 3chj_A Alpha-14 giardin; calci 35.8 14 0.00058 17.9 1.7 16 62-77 198-213 (337)
10 1vhn_A Putative flavin oxidore 35.6 7.3 0.00031 19.4 0.3 14 22-35 89-102 (318)
11 1yii_A Annexin A5, annexin V, 32.3 17 0.0007 17.4 1.7 46 14-81 20-65 (320)
12 2zhj_A Annexin A4; zynogen gra 32.2 17 0.00071 17.4 1.7 46 14-81 23-68 (322)
No 1
>2hyv_A Annexin A2; calcium-binding protein, membrane-binding protein, helix bundle, heparin, hexasaccharide, metal binding protein; HET: UAP SGN IDS; 1.42A {Homo sapiens} PDB: 2hyu_A* 2hyw_A 1w7b_A 1xjl_A
Probab=75.34 E-value=3.5 Score=21.10 Aligned_cols=46 Identities=30% Similarity=0.368 Sum_probs=31.9
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHE
Q ss_conf 99999999542970999999999867752112311166604606587026699999998853300202
Q gi|254781181|r 14 AVVIRLILKNFGCPLKRIVKVQKQAKSLANASQKLTVDQIDNSIMFLYPEQRQELAKRYKEKYNDVLI 81 (85)
Q Consensus 14 avvirlilknfgcplkrivkvqkqakslanasqkltvdqidnsimflypeqrqelakrykekyndvli 81 (85)
|-.+|--+|.|||.-+.|+.+ |++ .-++|||+++..|++.|..-|+
T Consensus 8 a~~l~~A~kg~gtde~~li~i------L~~----------------rs~~qr~~i~~~Y~~~yg~~L~ 53 (308)
T 2hyv_A 8 ALNIETAIKTKGVDEVTIVNI------LTN----------------RSNAQRQDIAFAYQRRTKKELA 53 (308)
T ss_dssp HHHHHHHHHSTTCCHHHHHHH------HTT----------------SCHHHHHHHHHHHHHHHSSCHH
T ss_pred HHHHHHHHCCCCCCHHHHHHH------HHC----------------CCHHHHHHHHHHHHHHHCCCHH
T ss_conf 999999863899988999999------836----------------9999999999999999795599
No 2
>1w3w_A Annexin A8; coagulation, annexin family, calcium and phospholipid binding proteins; 1.99A {Homo sapiens} PDB: 1w45_A
Probab=67.28 E-value=6.8 Score=19.53 Aligned_cols=46 Identities=28% Similarity=0.413 Sum_probs=31.1
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHE
Q ss_conf 99999999542970999999999867752112311166604606587026699999998853300202
Q gi|254781181|r 14 AVVIRLILKNFGCPLKRIVKVQKQAKSLANASQKLTVDQIDNSIMFLYPEQRQELAKRYKEKYNDVLI 81 (85)
Q Consensus 14 avvirlilknfgcplkrivkvqkqakslanasqkltvdqidnsimflypeqrqelakrykekyndvli 81 (85)
|-.++--+|.||+.-+.|+.+ |++ .-++|||+++++|+..|+.-|+
T Consensus 27 a~~L~~A~kg~gtde~~li~i------L~~----------------rs~~Qr~~i~~~Y~~~~g~dL~ 72 (327)
T 1w3w_A 27 AETLYKAMKGIGTNEQAIIDV------LTK----------------RSNTQRQQIAKSFKAQFGKDLT 72 (327)
T ss_dssp HHHHHHHHSSSSCCHHHHHHH------HTT----------------SCHHHHHHHHHHHHHHHSSCHH
T ss_pred HHHHHHHHCCCCCCHHHHHHH------HHC----------------CCHHHHHHHHHHHHHHHCCHHH
T ss_conf 999999860789988999999------827----------------9999999999999999782199
No 3
>1m9i_A Annexin VI; calcium-binding, membrane-binding, phosphorylation, mutant T356D, lipid binding protein; 2.65A {Homo sapiens} SCOP: a.65.1.1 a.65.1.1 PDB: 1avc_A
Probab=64.13 E-value=6 Score=19.81 Aligned_cols=20 Identities=45% Similarity=0.662 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHHHHHHHE
Q ss_conf 26699999998853300202
Q gi|254781181|r 62 PEQRQELAKRYKEKYNDVLI 81 (85)
Q Consensus 62 peqrqelakrykekyndvli 81 (85)
++|||+++..|+..|+.-|+
T Consensus 51 ~~QR~~I~~~Y~~~ygkdL~ 70 (672)
T 1m9i_A 51 NRQRQEVCQSYKSLYGKDLI 70 (672)
T ss_dssp HHHHHHHHHHHHHHHSSCHH
T ss_pred HHHHHHHHHHHHHHHCCCHH
T ss_conf 99999999999999797689
No 4
>2ii2_A Alpha-11 giardin; helix-turn-helix, metal binding protein; 1.10A {Giardia intestinalis} PDB: 2iic_A
Probab=58.50 E-value=3.6 Score=21.00 Aligned_cols=21 Identities=24% Similarity=0.422 Sum_probs=13.3
Q ss_pred EHHHHHHHHHHHHHHHHHHHE
Q ss_conf 026699999998853300202
Q gi|254781181|r 61 YPEQRQELAKRYKEKYNDVLI 81 (85)
Q Consensus 61 ypeqrqelakrykekyndvli 81 (85)
-++|||+++..|++.|+.-|+
T Consensus 33 s~~QR~~I~~~Y~~~yg~dL~ 53 (310)
T 2ii2_A 33 SAEERKELRTQFQDTTGLEFI 53 (310)
T ss_dssp CHHHHHHHHHHHHHHHSSCHH
T ss_pred CHHHHHHHHHHHHHHHCCCHH
T ss_conf 999999999999999796689
No 5
>1hm6_A Annexin 1; phospholipid/Ca(2+)-binding protein, calcium-free form, FULL-length protein comprising protein core and N-terminal domain, metal; 1.80A {Sus scrofa} SCOP: a.65.1.1 PDB: 1mcx_A 1ain_A 1bo9_A
Probab=56.21 E-value=12 Score=18.18 Aligned_cols=46 Identities=15% Similarity=0.146 Sum_probs=28.1
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHE
Q ss_conf 99999999542970999999999867752112311166604606587026699999998853300202
Q gi|254781181|r 14 AVVIRLILKNFGCPLKRIVKVQKQAKSLANASQKLTVDQIDNSIMFLYPEQRQELAKRYKEKYNDVLI 81 (85)
Q Consensus 14 avvirlilknfgcplkrivkvqkqakslanasqkltvdqidnsimflypeqrqelakrykekyndvli 81 (85)
|-.+|--+|.||+.-+.|+.+- + -.-++|||++++.|++.|+.-|+
T Consensus 48 ae~L~kA~kg~gtde~~li~IL------~----------------~rs~~Qr~~I~~~Y~~~yg~dL~ 93 (346)
T 1hm6_A 48 VEALHKAITVKGVDEATIIEIL------T----------------KRTNAQRQQIKAAYLQEKGKPLD 93 (346)
T ss_dssp HHHHHHHHSSTTCCHHHHHHHH------H----------------TSCHHHHHHHHHHHHHHHSSCHH
T ss_pred HHHHHHHHCCCCCCHHHHHHHH------H----------------CCCHHHHHHHHHHHHHHHCCCHH
T ss_conf 9999998648999999999998------1----------------59999999999999999698599
No 6
>1n00_A Annexin GH1; membrane-binding, calcium-binding, membrane protein; 2.10A {Gossypium hirsutum} SCOP: a.65.1.1 PDB: 3brx_A 1ycn_A 2q4c_A 1dk5_A
Probab=46.38 E-value=9.6 Score=18.71 Aligned_cols=46 Identities=26% Similarity=0.436 Sum_probs=30.4
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHE
Q ss_conf 99999999542970999999999867752112311166604606587026699999998853300202
Q gi|254781181|r 14 AVVIRLILKNFGCPLKRIVKVQKQAKSLANASQKLTVDQIDNSIMFLYPEQRQELAKRYKEKYNDVLI 81 (85)
Q Consensus 14 avvirlilknfgcplkrivkvqkqakslanasqkltvdqidnsimflypeqrqelakrykekyndvli 81 (85)
|-.++--+|.||+.-+.|+.+ |++ .-++|||++++.|++.|..-|+
T Consensus 22 a~~l~~A~kG~gtde~~li~i------L~~----------------rs~~qr~~i~~~Y~~~~g~dL~ 67 (321)
T 1n00_A 22 CEQLRKAFSGWGTNEGLIIDI------LGH----------------RNAEQRNLIRKTYAETYGEDLL 67 (321)
T ss_dssp HHHHHHHTSSSSCCHHHHHHH------HTT----------------CCHHHHHHHHHHHHHHHSSCHH
T ss_pred HHHHHHHHCCCCCCHHHHHHH------HHC----------------CCHHHHHHHHHHHHHHHCCCHH
T ss_conf 999999845789988999999------816----------------9999999999999999785089
No 7
>1axn_A Annexin III; annexin family, calcium/phospholipid-binding protein complex; 1.78A {Homo sapiens} SCOP: a.65.1.1 PDB: 1aii_A
Probab=40.46 E-value=10 Score=18.54 Aligned_cols=46 Identities=24% Similarity=0.326 Sum_probs=26.3
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHE
Q ss_conf 99999999542970999999999867752112311166604606587026699999998853300202
Q gi|254781181|r 14 AVVIRLILKNFGCPLKRIVKVQKQAKSLANASQKLTVDQIDNSIMFLYPEQRQELAKRYKEKYNDVLI 81 (85)
Q Consensus 14 avvirlilknfgcplkrivkvqkqakslanasqkltvdqidnsimflypeqrqelakrykekyndvli 81 (85)
|-.++--+|.||+.-+.|+.+- + -.-++|||+++++|++.|+.-|+
T Consensus 24 a~~L~~A~kg~gtde~~li~iL------~----------------~rs~~qr~~i~~~Y~~~~g~dL~ 69 (323)
T 1axn_A 24 AEAIQKAIRGIGTDEKMLISIL------T----------------ERSNAQRQLIVKEYQAAYGKELK 69 (323)
T ss_dssp HHHHHHHHSSSSCCHHHHHHHH------T----------------TSCHHHHHHHHHHHHHHHSCCHH
T ss_pred HHHHHHHHCCCCCCHHHHHHHH------H----------------CCCHHHHHHHHHHHHHHHCCCHH
T ss_conf 9999998528999889999998------1----------------69999999999999999787199
No 8
>2ovc_A Potassium voltage-gated channel subfamily KQT member 4; potassium channel, ION channel assembly, coiled-coil, tetramer, transport protein; 2.07A {Homo sapiens}
Probab=38.50 E-value=15 Score=17.65 Aligned_cols=17 Identities=41% Similarity=0.677 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 99999999986775211
Q gi|254781181|r 28 LKRIVKVQKQAKSLANA 44 (85)
Q Consensus 28 lkrivkvqkqakslana 44 (85)
+.|.|||.||..|..+.
T Consensus 9 ~grvvkvekqvqsie~k 25 (33)
T 2ovc_A 9 MGRVVKVEKQVQSIEHK 25 (33)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 98899999999979999
No 9
>3chj_A Alpha-14 giardin; calcium-binding, annexin, metal binding protein; 1.60A {Giardia lamblia} PDB: 3chk_A 3chl_A
Probab=35.78 E-value=14 Score=17.87 Aligned_cols=16 Identities=38% Similarity=0.571 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 2669999999885330
Q gi|254781181|r 62 PEQRQELAKRYKEKYN 77 (85)
Q Consensus 62 peqrqelakrykekyn 77 (85)
+.|-+.+.+.|+.+|+
T Consensus 198 ~~ql~~i~~~Y~~~~~ 213 (337)
T 3chj_A 198 RADFRQLHKMYSAKYN 213 (337)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHC
T ss_conf 9999999999998865
No 10
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=35.59 E-value=7.3 Score=19.36 Aligned_cols=14 Identities=43% Similarity=0.930 Sum_probs=10.1
Q ss_pred HHCCCHHHHHHHHH
Q ss_conf 54297099999999
Q gi|254781181|r 22 KNFGCPLKRIVKVQ 35 (85)
Q Consensus 22 knfgcplkrivkvq 35 (85)
-|+|||-+++++-.
T Consensus 89 lN~GCP~~~v~~~g 102 (318)
T 1vhn_A 89 LNAGCPVRKVVKEG 102 (318)
T ss_dssp EEECCCCHHHHHTT
T ss_pred EECCCCHHHHCCCC
T ss_conf 67478989976689
No 11
>1yii_A Annexin A5, annexin V, lipocortin V, endonexin II; membrane binding, matrix vessicle, protein and metal binding protein; 1.42A {Gallus gallus} PDB: 1yj0_A 1ala_A 1hvd_A 1anx_A 1anw_A 1avh_A 1avr_A 1hak_B* 1hvf_A 1hve_A 1hvg_A 1a8a_A* 1a8b_A* 2ie7_A 1g5n_A 2ie6_A 1bcz_A 1n41_A 1bcw_A 2ran_A ...
Probab=32.31 E-value=17 Score=17.40 Aligned_cols=46 Identities=28% Similarity=0.393 Sum_probs=27.0
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHE
Q ss_conf 99999999542970999999999867752112311166604606587026699999998853300202
Q gi|254781181|r 14 AVVIRLILKNFGCPLKRIVKVQKQAKSLANASQKLTVDQIDNSIMFLYPEQRQELAKRYKEKYNDVLI 81 (85)
Q Consensus 14 avvirlilknfgcplkrivkvqkqakslanasqkltvdqidnsimflypeqrqelakrykekyndvli 81 (85)
|-.|+--+|.|||.-+.++.+-- -.-++|||++++.|+..|+.-|+
T Consensus 20 a~~L~~A~kg~g~de~~li~iL~----------------------~rs~~qr~~i~~~Y~~~~g~~L~ 65 (320)
T 1yii_A 20 AEALRKAMKGMGTDEETILKILT----------------------SRNNAQRQEIASAFKTLFGRDLV 65 (320)
T ss_dssp HHHHHHHHSSSSCCHHHHHHHHH----------------------HSCHHHHHHHHHHHHHHHSCCHH
T ss_pred HHHHHHHHCCCCCCHHHHHHHHH----------------------CCCHHHHHHHHHHHHHHHCCCHH
T ss_conf 99999984378998999999984----------------------59999999999999999786589
No 12
>2zhj_A Annexin A4; zynogen granule, membrane binding protein, metal binding protein, calcium, calcium/phospholipid-binding; 1.35A {Rattus norvegicus} PDB: 2zhi_A 2zoc_A 1ann_A 1i4a_A 1aow_A
Probab=32.19 E-value=17 Score=17.39 Aligned_cols=46 Identities=33% Similarity=0.398 Sum_probs=26.6
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHE
Q ss_conf 99999999542970999999999867752112311166604606587026699999998853300202
Q gi|254781181|r 14 AVVIRLILKNFGCPLKRIVKVQKQAKSLANASQKLTVDQIDNSIMFLYPEQRQELAKRYKEKYNDVLI 81 (85)
Q Consensus 14 avvirlilknfgcplkrivkvqkqakslanasqkltvdqidnsimflypeqrqelakrykekyndvli 81 (85)
|-.++--+|.||+.-+.|+.+- ++ .-++|||++.+.|++.|+.-|+
T Consensus 23 a~~L~~A~kg~g~de~~li~iL------~~----------------rs~~qr~~i~~~Y~~~~g~dL~ 68 (322)
T 2zhj_A 23 AQVLRKAMKGLGTDEDAIIGVL------AC----------------RNTAQRQEIRTAYKSTIGRDLL 68 (322)
T ss_dssp HHHHHHHHSSSSCCHHHHHHHH------TT----------------SCHHHHHHHHHHHHHHHCSCHH
T ss_pred HHHHHHHHCCCCCCHHHHHHHH------HC----------------CCHHHHHHHHHHHHHHHCCCHH
T ss_conf 9999998527999889999998------07----------------9999999999999999796389
Done!