Query         gi|254781181|ref|YP_003065594.1| hypothetical protein CLIBASIA_05440 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 85
No_of_seqs    1 out of 3
Neff          1.0 
Searched_HMMs 13730
Date          Wed Jun  1 11:39:56 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254781181.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1n00a_ a.65.1.1 (A:) Annexin   54.7     7.4 0.00054   18.0   4.2   47   13-81     18-64  (318)
  2 d1hm6a_ a.65.1.1 (A:) Annexin   43.9     2.8 0.00021   20.3   0.5   46   14-81     47-92  (343)
  3 d2fmla1 a.4.5.68 (A:205-268) H  38.7       5 0.00036   19.0   1.1   22   36-57     14-35  (64)
  4 d1dm5a_ a.65.1.1 (A:) Annexin   36.8      15  0.0011   16.4   4.4   45   14-80     18-62  (315)
  5 d1i4aa_ a.65.1.1 (A:) Annexin   33.9      16  0.0012   16.2   4.4   20   61-80     35-54  (309)
  6 d1avca1 a.65.1.1 (A:10-350) An  33.7     4.7 0.00034   19.1   0.3   46   14-81     17-62  (341)
  7 d1w7ba_ a.65.1.1 (A:) Annexin   33.6      16  0.0012   16.1   4.7   46   14-81     19-64  (319)
  8 d1avca2 a.65.1.1 (A:351-671) A  32.4     9.7 0.00071   17.4   1.7   21   61-81     44-64  (321)
  9 d1axna_ a.65.1.1 (A:) Annexin   31.5     9.1 0.00066   17.5   1.5   21   61-81     49-69  (323)
 10 d1vhna_ c.1.4.1 (A:) Putative   30.9     5.6 0.00041   18.7   0.3   13   22-34     85-97  (305)
 11 d2ie7a1 a.65.1.1 (A:2-319) Ann  26.1     7.8 0.00057   17.9   0.4   46   14-81     18-63  (318)

No 1  
>d1n00a_ a.65.1.1 (A:) Annexin GH1 {Cotton (Gossypium hirsutum) [TaxId: 3635]}
Probab=54.67  E-value=7.4  Score=18.03  Aligned_cols=47  Identities=26%  Similarity=0.406  Sum_probs=26.7

Q ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHE
Q ss_conf             999999999542970999999999867752112311166604606587026699999998853300202
Q gi|254781181|r   13 VAVVIRLILKNFGCPLKRIVKVQKQAKSLANASQKLTVDQIDNSIMFLYPEQRQELAKRYKEKYNDVLI   81 (85)
Q Consensus        13 vavvirlilknfgcplkrivkvqkqakslanasqkltvdqidnsimflypeqrqelakrykekyndvli   81 (85)
                      -|-.++--.|.||+--+.|+.+      |++                .-++|||+++..|++.|+.-|+
T Consensus        18 Da~~L~~A~kG~gtde~~ii~i------l~~----------------rs~~qr~~i~~~Y~~~~gkdL~   64 (318)
T d1n00a_          18 DCEQLRKAFSGWGTNEGLIIDI------LGH----------------RNAEQRNLIRKTYAETYGEDLL   64 (318)
T ss_dssp             HHHHHHHHTSSSSCCHHHHHHH------HTT----------------CCHHHHHHHHHHHHHHHSSCHH
T ss_pred             HHHHHHHHHCCCCCCHHHHHHH------HHC----------------CCHHHHHHHHHHHHHHHCCCHH
T ss_conf             9999999834789988999999------855----------------9999999999999999796499


No 2  
>d1hm6a_ a.65.1.1 (A:) Annexin I {Pig (Sus scrofa) [TaxId: 9823]}
Probab=43.95  E-value=2.8  Score=20.30  Aligned_cols=46  Identities=15%  Similarity=0.142  Sum_probs=27.6

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHE
Q ss_conf             99999999542970999999999867752112311166604606587026699999998853300202
Q gi|254781181|r   14 AVVIRLILKNFGCPLKRIVKVQKQAKSLANASQKLTVDQIDNSIMFLYPEQRQELAKRYKEKYNDVLI   81 (85)
Q Consensus        14 avvirlilknfgcplkrivkvqkqakslanasqkltvdqidnsimflypeqrqelakrykekyndvli   81 (85)
                      |-.++--+|.|||--+.|+.+--                      -.-++|||++++.|++.|+.-|+
T Consensus        47 a~~L~kA~kg~gtDe~~ii~IL~----------------------~rs~~Qr~~I~~~Y~~~ygkdL~   92 (343)
T d1hm6a_          47 VEALHKAITVKGVDEATIIEILT----------------------KRTNAQRQQIKAAYLQEKGKPLD   92 (343)
T ss_dssp             HHHHHHHHSSTTCCHHHHHHHHH----------------------TSCHHHHHHHHHHHHHHHSSCHH
T ss_pred             HHHHHHHHCCCCCCHHHHHHHHH----------------------CCCHHHHHHHHHHHHHHHCCCHH
T ss_conf             99999984379999899999983----------------------39999999999999998597699


No 3  
>d2fmla1 a.4.5.68 (A:205-268) Hypothetical protein EF2700, C-terminal domain {Enterococcus faecalis [TaxId: 1351]}
Probab=38.73  E-value=5  Score=18.96  Aligned_cols=22  Identities=18%  Similarity=0.157  Sum_probs=16.1

Q ss_pred             HHHHHHHHHHHHCCHHHCCCEE
Q ss_conf             9867752112311166604606
Q gi|254781181|r   36 KQAKSLANASQKLTVDQIDNSI   57 (85)
Q Consensus        36 kqakslanasqkltvdqidnsi   57 (85)
                      +||...-..--+.++|.||||-
T Consensus        14 k~AR~Vya~Fl~~~~~~IDnSN   35 (64)
T d2fmla1          14 TEARKVFAKFLGVDYRSIDHSN   35 (64)
T ss_dssp             HHHHHHHHHHHTSCGGGSCHHH
T ss_pred             HHHHHHHHHHHCCCCCCCCCHH
T ss_conf             9999999999488801134226


No 4  
>d1dm5a_ a.65.1.1 (A:) Annexin XII {Hydra vulgaris [TaxId: 6087]}
Probab=36.83  E-value=15  Score=16.44  Aligned_cols=45  Identities=27%  Similarity=0.370  Sum_probs=27.0

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999954297099999999986775211231116660460658702669999999885330020
Q gi|254781181|r   14 AVVIRLILKNFGCPLKRIVKVQKQAKSLANASQKLTVDQIDNSIMFLYPEQRQELAKRYKEKYNDVL   80 (85)
Q Consensus        14 avvirlilknfgcplkrivkvqkqakslanasqkltvdqidnsimflypeqrqelakrykekyndvl   80 (85)
                      |-.++--+|.|||--+.|+.+-      ++                .-++|||+++..|+..|+.-|
T Consensus        18 a~~L~~A~kg~g~de~~li~il------~~----------------rs~~qr~~i~~~Y~~~yg~~L   62 (315)
T d1dm5a_          18 AETLRKAMKGIGTDEKSITHIL------AT----------------RSNAQRQQIKTDYTTLFGKHL   62 (315)
T ss_dssp             HHHHHHHHSSSSCCHHHHHHHH------HH----------------SCHHHHHHHHHHHHHHHSSCH
T ss_pred             HHHHHHHHCCCCCCHHHHHHHH------HC----------------CCHHHHHHHHHHHHHHHCCCH
T ss_conf             9999998437899899999999------54----------------999999999999999979678


No 5  
>d1i4aa_ a.65.1.1 (A:) Annexin IV {Cow (Bos taurus) [TaxId: 9913]}
Probab=33.90  E-value=16  Score=16.18  Aligned_cols=20  Identities=35%  Similarity=0.419  Sum_probs=12.5

Q ss_pred             EHHHHHHHHHHHHHHHHHHH
Q ss_conf             02669999999885330020
Q gi|254781181|r   61 YPEQRQELAKRYKEKYNDVL   80 (85)
Q Consensus        61 ypeqrqelakrykekyndvl   80 (85)
                      -+.|||+++..|+..|+.-|
T Consensus        35 s~~qr~~i~~~Y~~~yg~dL   54 (309)
T d1i4aa_          35 STAQRQEIRTAYKTTIGRDL   54 (309)
T ss_dssp             CHHHHHHHHHHHHHHHSSCH
T ss_pred             CHHHHHHHHHHHHHHHCCCH
T ss_conf             99999999999999978559


No 6  
>d1avca1 a.65.1.1 (A:10-350) Annexin VI {Cow (Bos taurus) [TaxId: 9913]}
Probab=33.68  E-value=4.7  Score=19.09  Aligned_cols=46  Identities=30%  Similarity=0.490  Sum_probs=26.2

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHE
Q ss_conf             99999999542970999999999867752112311166604606587026699999998853300202
Q gi|254781181|r   14 AVVIRLILKNFGCPLKRIVKVQKQAKSLANASQKLTVDQIDNSIMFLYPEQRQELAKRYKEKYNDVLI   81 (85)
Q Consensus        14 avvirlilknfgcplkrivkvqkqakslanasqkltvdqidnsimflypeqrqelakrykekyndvli   81 (85)
                      |-.++--+|.||+--+.|+.+      |++                .-++|||+++..|++.|+.-|+
T Consensus        17 a~~L~~A~kg~gtDe~~li~I------L~~----------------rs~~qr~~i~~~Y~~~ygkdL~   62 (341)
T d1avca1          17 AETLYNAMKGFGSDKEAIINL------ITS----------------RSNKQRQEICQNYKSLYGKDLI   62 (341)
T ss_dssp             HHHHHHHTCSSSCCHHHHHHH------HTT----------------SCHHHHHHHHHHHHHHHSSCHH
T ss_pred             HHHHHHHHHCCCCCHHHHHHH------HHC----------------CCHHHHHHHHHHHHHHHCCCHH
T ss_conf             999999861789988999999------852----------------9999999999999999796589


No 7  
>d1w7ba_ a.65.1.1 (A:) Annexin II {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.60  E-value=16  Score=16.15  Aligned_cols=46  Identities=33%  Similarity=0.394  Sum_probs=28.2

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHE
Q ss_conf             99999999542970999999999867752112311166604606587026699999998853300202
Q gi|254781181|r   14 AVVIRLILKNFGCPLKRIVKVQKQAKSLANASQKLTVDQIDNSIMFLYPEQRQELAKRYKEKYNDVLI   81 (85)
Q Consensus        14 avvirlilknfgcplkrivkvqkqakslanasqkltvdqidnsimflypeqrqelakrykekyndvli   81 (85)
                      |-.++--+|.||+--+.|+.+      |++                .-++||+++++.|++.|+--|+
T Consensus        19 a~~L~~A~kg~gtde~~ii~I------L~~----------------rs~~qr~~i~~~Y~~~yg~~L~   64 (319)
T d1w7ba_          19 ALNIETAIKTKGVDEVTIVNI------LTN----------------RSNEQRQDIAFAYQRRTKKELA   64 (319)
T ss_dssp             HHHHHHHHHSTTCCHHHHHHH------HTT----------------SCHHHHHHHHHHHHHHHSSCHH
T ss_pred             HHHHHHHHCCCCCCHHHHHHH------HHC----------------CCHHHHHHHHHHHHHHHCCCHH
T ss_conf             999999851789988999999------964----------------9999999999999999795799


No 8  
>d1avca2 a.65.1.1 (A:351-671) Annexin VI {Cow (Bos taurus) [TaxId: 9913]}
Probab=32.38  E-value=9.7  Score=17.39  Aligned_cols=21  Identities=24%  Similarity=0.483  Sum_probs=14.4

Q ss_pred             EHHHHHHHHHHHHHHHHHHHE
Q ss_conf             026699999998853300202
Q gi|254781181|r   61 YPEQRQELAKRYKEKYNDVLI   81 (85)
Q Consensus        61 ypeqrqelakrykekyndvli   81 (85)
                      -++|||++++.|++.|+.-|+
T Consensus        44 s~~qr~~i~~~Y~~~~g~dL~   64 (321)
T d1avca2          44 SNAQRQQIRQTFKSHFGRDLM   64 (321)
T ss_dssp             CHHHHHHHHHHHHHHHSSCHH
T ss_pred             CHHHHHHHHHHHHHHHCCCHH
T ss_conf             999999999999898686399


No 9  
>d1axna_ a.65.1.1 (A:) Annexin III {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.52  E-value=9.1  Score=17.54  Aligned_cols=21  Identities=33%  Similarity=0.455  Sum_probs=14.9

Q ss_pred             EHHHHHHHHHHHHHHHHHHHE
Q ss_conf             026699999998853300202
Q gi|254781181|r   61 YPEQRQELAKRYKEKYNDVLI   81 (85)
Q Consensus        61 ypeqrqelakrykekyndvli   81 (85)
                      -++|||+++..|++.|+.-|+
T Consensus        49 s~~qr~~I~~~Y~~~ygkdL~   69 (323)
T d1axna_          49 SNAQRQLIVKEYQAAYGKELK   69 (323)
T ss_dssp             CHHHHHHHHHHHHHHHSCCHH
T ss_pred             CHHHHHHHHHHHHHHHCCCHH
T ss_conf             999999999999999797599


No 10 
>d1vhna_ c.1.4.1 (A:) Putative flavin oxidoreducatase TM0096 {Thermotoga maritima [TaxId: 2336]}
Probab=30.87  E-value=5.6  Score=18.69  Aligned_cols=13  Identities=46%  Similarity=1.027  Sum_probs=9.3

Q ss_pred             HHCCCHHHHHHHH
Q ss_conf             5429709999999
Q gi|254781181|r   22 KNFGCPLKRIVKV   34 (85)
Q Consensus        22 knfgcplkrivkv   34 (85)
                      -|+|||-+++++-
T Consensus        85 lN~GCP~~~v~~~   97 (305)
T d1vhna_          85 LNAGCPVRKVVKE   97 (305)
T ss_dssp             EEECCCCHHHHHT
T ss_pred             EEEEECCHHHCCC
T ss_conf             8987442022144


No 11 
>d2ie7a1 a.65.1.1 (A:2-319) Annexin V {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=26.13  E-value=7.8  Score=17.92  Aligned_cols=46  Identities=26%  Similarity=0.407  Sum_probs=28.6

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHE
Q ss_conf             99999999542970999999999867752112311166604606587026699999998853300202
Q gi|254781181|r   14 AVVIRLILKNFGCPLKRIVKVQKQAKSLANASQKLTVDQIDNSIMFLYPEQRQELAKRYKEKYNDVLI   81 (85)
Q Consensus        14 avvirlilknfgcplkrivkvqkqakslanasqkltvdqidnsimflypeqrqelakrykekyndvli   81 (85)
                      |-.++--+|.||+--+.|+.+-      ++                .-++|||++++.|++.|+.-|+
T Consensus        18 a~~L~~A~kg~g~de~~ii~Il------~~----------------rs~~qr~~i~~~Y~~~~g~~L~   63 (318)
T d2ie7a1          18 AEVLRKAMKGLGTDEDSILNLL------TA----------------RSNAQRQQIAEEFKTLFGRDLV   63 (318)
T ss_dssp             HHHHHHHHSSSSCCHHHHHHHH------TT----------------SCHHHHHHHHHHHHHHHSSCHH
T ss_pred             HHHHHHHHCCCCCCHHHHHHHH------HC----------------CCHHHHHHHHHHHHHHHCCCHH
T ss_conf             9999998537899899999999------74----------------9999999999999999796589


Done!