Query gi|254781181|ref|YP_003065594.1| hypothetical protein CLIBASIA_05440 [Candidatus Liberibacter asiaticus str. psy62] Match_columns 85 No_of_seqs 1 out of 3 Neff 1.0 Searched_HMMs 13730 Date Wed Jun 1 11:39:56 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254781181.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1n00a_ a.65.1.1 (A:) Annexin 54.7 7.4 0.00054 18.0 4.2 47 13-81 18-64 (318) 2 d1hm6a_ a.65.1.1 (A:) Annexin 43.9 2.8 0.00021 20.3 0.5 46 14-81 47-92 (343) 3 d2fmla1 a.4.5.68 (A:205-268) H 38.7 5 0.00036 19.0 1.1 22 36-57 14-35 (64) 4 d1dm5a_ a.65.1.1 (A:) Annexin 36.8 15 0.0011 16.4 4.4 45 14-80 18-62 (315) 5 d1i4aa_ a.65.1.1 (A:) Annexin 33.9 16 0.0012 16.2 4.4 20 61-80 35-54 (309) 6 d1avca1 a.65.1.1 (A:10-350) An 33.7 4.7 0.00034 19.1 0.3 46 14-81 17-62 (341) 7 d1w7ba_ a.65.1.1 (A:) Annexin 33.6 16 0.0012 16.1 4.7 46 14-81 19-64 (319) 8 d1avca2 a.65.1.1 (A:351-671) A 32.4 9.7 0.00071 17.4 1.7 21 61-81 44-64 (321) 9 d1axna_ a.65.1.1 (A:) Annexin 31.5 9.1 0.00066 17.5 1.5 21 61-81 49-69 (323) 10 d1vhna_ c.1.4.1 (A:) Putative 30.9 5.6 0.00041 18.7 0.3 13 22-34 85-97 (305) 11 d2ie7a1 a.65.1.1 (A:2-319) Ann 26.1 7.8 0.00057 17.9 0.4 46 14-81 18-63 (318) No 1 >d1n00a_ a.65.1.1 (A:) Annexin GH1 {Cotton (Gossypium hirsutum) [TaxId: 3635]} Probab=54.67 E-value=7.4 Score=18.03 Aligned_cols=47 Identities=26% Similarity=0.406 Sum_probs=26.7 Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHE Q ss_conf 999999999542970999999999867752112311166604606587026699999998853300202 Q gi|254781181|r 13 VAVVIRLILKNFGCPLKRIVKVQKQAKSLANASQKLTVDQIDNSIMFLYPEQRQELAKRYKEKYNDVLI 81 (85) Q Consensus 13 vavvirlilknfgcplkrivkvqkqakslanasqkltvdqidnsimflypeqrqelakrykekyndvli 81 (85) -|-.++--.|.||+--+.|+.+ |++ .-++|||+++..|++.|+.-|+ T Consensus 18 Da~~L~~A~kG~gtde~~ii~i------l~~----------------rs~~qr~~i~~~Y~~~~gkdL~ 64 (318) T d1n00a_ 18 DCEQLRKAFSGWGTNEGLIIDI------LGH----------------RNAEQRNLIRKTYAETYGEDLL 64 (318) T ss_dssp HHHHHHHHTSSSSCCHHHHHHH------HTT----------------CCHHHHHHHHHHHHHHHSSCHH T ss_pred HHHHHHHHHCCCCCCHHHHHHH------HHC----------------CCHHHHHHHHHHHHHHHCCCHH T ss_conf 9999999834789988999999------855----------------9999999999999999796499 No 2 >d1hm6a_ a.65.1.1 (A:) Annexin I {Pig (Sus scrofa) [TaxId: 9823]} Probab=43.95 E-value=2.8 Score=20.30 Aligned_cols=46 Identities=15% Similarity=0.142 Sum_probs=27.6 Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHE Q ss_conf 99999999542970999999999867752112311166604606587026699999998853300202 Q gi|254781181|r 14 AVVIRLILKNFGCPLKRIVKVQKQAKSLANASQKLTVDQIDNSIMFLYPEQRQELAKRYKEKYNDVLI 81 (85) Q Consensus 14 avvirlilknfgcplkrivkvqkqakslanasqkltvdqidnsimflypeqrqelakrykekyndvli 81 (85) |-.++--+|.|||--+.|+.+-- -.-++|||++++.|++.|+.-|+ T Consensus 47 a~~L~kA~kg~gtDe~~ii~IL~----------------------~rs~~Qr~~I~~~Y~~~ygkdL~ 92 (343) T d1hm6a_ 47 VEALHKAITVKGVDEATIIEILT----------------------KRTNAQRQQIKAAYLQEKGKPLD 92 (343) T ss_dssp HHHHHHHHSSTTCCHHHHHHHHH----------------------TSCHHHHHHHHHHHHHHHSSCHH T ss_pred HHHHHHHHCCCCCCHHHHHHHHH----------------------CCCHHHHHHHHHHHHHHHCCCHH T ss_conf 99999984379999899999983----------------------39999999999999998597699 No 3 >d2fmla1 a.4.5.68 (A:205-268) Hypothetical protein EF2700, C-terminal domain {Enterococcus faecalis [TaxId: 1351]} Probab=38.73 E-value=5 Score=18.96 Aligned_cols=22 Identities=18% Similarity=0.157 Sum_probs=16.1 Q ss_pred HHHHHHHHHHHHCCHHHCCCEE Q ss_conf 9867752112311166604606 Q gi|254781181|r 36 KQAKSLANASQKLTVDQIDNSI 57 (85) Q Consensus 36 kqakslanasqkltvdqidnsi 57 (85) +||...-..--+.++|.||||- T Consensus 14 k~AR~Vya~Fl~~~~~~IDnSN 35 (64) T d2fmla1 14 TEARKVFAKFLGVDYRSIDHSN 35 (64) T ss_dssp HHHHHHHHHHHTSCGGGSCHHH T ss_pred HHHHHHHHHHHCCCCCCCCCHH T ss_conf 9999999999488801134226 No 4 >d1dm5a_ a.65.1.1 (A:) Annexin XII {Hydra vulgaris [TaxId: 6087]} Probab=36.83 E-value=15 Score=16.44 Aligned_cols=45 Identities=27% Similarity=0.370 Sum_probs=27.0 Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHH Q ss_conf 9999999954297099999999986775211231116660460658702669999999885330020 Q gi|254781181|r 14 AVVIRLILKNFGCPLKRIVKVQKQAKSLANASQKLTVDQIDNSIMFLYPEQRQELAKRYKEKYNDVL 80 (85) Q Consensus 14 avvirlilknfgcplkrivkvqkqakslanasqkltvdqidnsimflypeqrqelakrykekyndvl 80 (85) |-.++--+|.|||--+.|+.+- ++ .-++|||+++..|+..|+.-| T Consensus 18 a~~L~~A~kg~g~de~~li~il------~~----------------rs~~qr~~i~~~Y~~~yg~~L 62 (315) T d1dm5a_ 18 AETLRKAMKGIGTDEKSITHIL------AT----------------RSNAQRQQIKTDYTTLFGKHL 62 (315) T ss_dssp HHHHHHHHSSSSCCHHHHHHHH------HH----------------SCHHHHHHHHHHHHHHHSSCH T ss_pred HHHHHHHHCCCCCCHHHHHHHH------HC----------------CCHHHHHHHHHHHHHHHCCCH T ss_conf 9999998437899899999999------54----------------999999999999999979678 No 5 >d1i4aa_ a.65.1.1 (A:) Annexin IV {Cow (Bos taurus) [TaxId: 9913]} Probab=33.90 E-value=16 Score=16.18 Aligned_cols=20 Identities=35% Similarity=0.419 Sum_probs=12.5 Q ss_pred EHHHHHHHHHHHHHHHHHHH Q ss_conf 02669999999885330020 Q gi|254781181|r 61 YPEQRQELAKRYKEKYNDVL 80 (85) Q Consensus 61 ypeqrqelakrykekyndvl 80 (85) -+.|||+++..|+..|+.-| T Consensus 35 s~~qr~~i~~~Y~~~yg~dL 54 (309) T d1i4aa_ 35 STAQRQEIRTAYKTTIGRDL 54 (309) T ss_dssp CHHHHHHHHHHHHHHHSSCH T ss_pred CHHHHHHHHHHHHHHHCCCH T ss_conf 99999999999999978559 No 6 >d1avca1 a.65.1.1 (A:10-350) Annexin VI {Cow (Bos taurus) [TaxId: 9913]} Probab=33.68 E-value=4.7 Score=19.09 Aligned_cols=46 Identities=30% Similarity=0.490 Sum_probs=26.2 Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHE Q ss_conf 99999999542970999999999867752112311166604606587026699999998853300202 Q gi|254781181|r 14 AVVIRLILKNFGCPLKRIVKVQKQAKSLANASQKLTVDQIDNSIMFLYPEQRQELAKRYKEKYNDVLI 81 (85) Q Consensus 14 avvirlilknfgcplkrivkvqkqakslanasqkltvdqidnsimflypeqrqelakrykekyndvli 81 (85) |-.++--+|.||+--+.|+.+ |++ .-++|||+++..|++.|+.-|+ T Consensus 17 a~~L~~A~kg~gtDe~~li~I------L~~----------------rs~~qr~~i~~~Y~~~ygkdL~ 62 (341) T d1avca1 17 AETLYNAMKGFGSDKEAIINL------ITS----------------RSNKQRQEICQNYKSLYGKDLI 62 (341) T ss_dssp HHHHHHHTCSSSCCHHHHHHH------HTT----------------SCHHHHHHHHHHHHHHHSSCHH T ss_pred HHHHHHHHHCCCCCHHHHHHH------HHC----------------CCHHHHHHHHHHHHHHHCCCHH T ss_conf 999999861789988999999------852----------------9999999999999999796589 No 7 >d1w7ba_ a.65.1.1 (A:) Annexin II {Human (Homo sapiens) [TaxId: 9606]} Probab=33.60 E-value=16 Score=16.15 Aligned_cols=46 Identities=33% Similarity=0.394 Sum_probs=28.2 Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHE Q ss_conf 99999999542970999999999867752112311166604606587026699999998853300202 Q gi|254781181|r 14 AVVIRLILKNFGCPLKRIVKVQKQAKSLANASQKLTVDQIDNSIMFLYPEQRQELAKRYKEKYNDVLI 81 (85) Q Consensus 14 avvirlilknfgcplkrivkvqkqakslanasqkltvdqidnsimflypeqrqelakrykekyndvli 81 (85) |-.++--+|.||+--+.|+.+ |++ .-++||+++++.|++.|+--|+ T Consensus 19 a~~L~~A~kg~gtde~~ii~I------L~~----------------rs~~qr~~i~~~Y~~~yg~~L~ 64 (319) T d1w7ba_ 19 ALNIETAIKTKGVDEVTIVNI------LTN----------------RSNEQRQDIAFAYQRRTKKELA 64 (319) T ss_dssp HHHHHHHHHSTTCCHHHHHHH------HTT----------------SCHHHHHHHHHHHHHHHSSCHH T ss_pred HHHHHHHHCCCCCCHHHHHHH------HHC----------------CCHHHHHHHHHHHHHHHCCCHH T ss_conf 999999851789988999999------964----------------9999999999999999795799 No 8 >d1avca2 a.65.1.1 (A:351-671) Annexin VI {Cow (Bos taurus) [TaxId: 9913]} Probab=32.38 E-value=9.7 Score=17.39 Aligned_cols=21 Identities=24% Similarity=0.483 Sum_probs=14.4 Q ss_pred EHHHHHHHHHHHHHHHHHHHE Q ss_conf 026699999998853300202 Q gi|254781181|r 61 YPEQRQELAKRYKEKYNDVLI 81 (85) Q Consensus 61 ypeqrqelakrykekyndvli 81 (85) -++|||++++.|++.|+.-|+ T Consensus 44 s~~qr~~i~~~Y~~~~g~dL~ 64 (321) T d1avca2 44 SNAQRQQIRQTFKSHFGRDLM 64 (321) T ss_dssp CHHHHHHHHHHHHHHHSSCHH T ss_pred CHHHHHHHHHHHHHHHCCCHH T ss_conf 999999999999898686399 No 9 >d1axna_ a.65.1.1 (A:) Annexin III {Human (Homo sapiens) [TaxId: 9606]} Probab=31.52 E-value=9.1 Score=17.54 Aligned_cols=21 Identities=33% Similarity=0.455 Sum_probs=14.9 Q ss_pred EHHHHHHHHHHHHHHHHHHHE Q ss_conf 026699999998853300202 Q gi|254781181|r 61 YPEQRQELAKRYKEKYNDVLI 81 (85) Q Consensus 61 ypeqrqelakrykekyndvli 81 (85) -++|||+++..|++.|+.-|+ T Consensus 49 s~~qr~~I~~~Y~~~ygkdL~ 69 (323) T d1axna_ 49 SNAQRQLIVKEYQAAYGKELK 69 (323) T ss_dssp CHHHHHHHHHHHHHHHSCCHH T ss_pred CHHHHHHHHHHHHHHHCCCHH T ss_conf 999999999999999797599 No 10 >d1vhna_ c.1.4.1 (A:) Putative flavin oxidoreducatase TM0096 {Thermotoga maritima [TaxId: 2336]} Probab=30.87 E-value=5.6 Score=18.69 Aligned_cols=13 Identities=46% Similarity=1.027 Sum_probs=9.3 Q ss_pred HHCCCHHHHHHHH Q ss_conf 5429709999999 Q gi|254781181|r 22 KNFGCPLKRIVKV 34 (85) Q Consensus 22 knfgcplkrivkv 34 (85) -|+|||-+++++- T Consensus 85 lN~GCP~~~v~~~ 97 (305) T d1vhna_ 85 LNAGCPVRKVVKE 97 (305) T ss_dssp EEECCCCHHHHHT T ss_pred EEEEECCHHHCCC T ss_conf 8987442022144 No 11 >d2ie7a1 a.65.1.1 (A:2-319) Annexin V {Rat (Rattus norvegicus) [TaxId: 10116]} Probab=26.13 E-value=7.8 Score=17.92 Aligned_cols=46 Identities=26% Similarity=0.407 Sum_probs=28.6 Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHE Q ss_conf 99999999542970999999999867752112311166604606587026699999998853300202 Q gi|254781181|r 14 AVVIRLILKNFGCPLKRIVKVQKQAKSLANASQKLTVDQIDNSIMFLYPEQRQELAKRYKEKYNDVLI 81 (85) Q Consensus 14 avvirlilknfgcplkrivkvqkqakslanasqkltvdqidnsimflypeqrqelakrykekyndvli 81 (85) |-.++--+|.||+--+.|+.+- ++ .-++|||++++.|++.|+.-|+ T Consensus 18 a~~L~~A~kg~g~de~~ii~Il------~~----------------rs~~qr~~i~~~Y~~~~g~~L~ 63 (318) T d2ie7a1 18 AEVLRKAMKGLGTDEDSILNLL------TA----------------RSNAQRQQIAEEFKTLFGRDLV 63 (318) T ss_dssp HHHHHHHHSSSSCCHHHHHHHH------TT----------------SCHHHHHHHHHHHHHHHSSCHH T ss_pred HHHHHHHHCCCCCCHHHHHHHH------HC----------------CCHHHHHHHHHHHHHHHCCCHH T ss_conf 9999998537899899999999------74----------------9999999999999999796589 Done!