HHSEARCH alignment of GI: 254781182 and SCOP domain: d3c8ga1

Alignment
>d3c8ga1 a.285.1.1 (A:1-168) Putative transcriptional regulator YggD {Shigella flexneri [TaxId: 623]}
Probab=94.31  E-value=0.083  Score=28.71  Aligned_cols=49  Identities=2%  Similarity=-0.157  Sum_probs=41.7

Q ss_pred             CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC---CCHHHHHH
Q ss_conf             44889999999998689998999999999997313206888---89899999
Q gi|254781182|r   13 KCGMLSDRTRYLKQHNLIIEEIFEWSNFVRIEGNKAVHEGQ---SSIEESDE   61 (94)
Q Consensus        13 k~g~l~dri~~L~~~g~I~~~i~~~~~~~R~~gN~a~H~g~---~~~edA~~   61 (94)
                      +-|+++-||+.++.=|+|++...+-++.+|...|..+|.++   |+.+....
T Consensus        63 PLg~~svrikL~~~LG~Is~~~y~Di~~~~~irn~~~h~~~~~~F~dd~i~~  114 (168)
T d3c8ga1          63 PLDDIDVALRLIYALGKMDKWLYADITHFSQYWHYLNEQDETPGFADDITWD  114 (168)
T ss_dssp             TTCSHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHTCCCCCTTSHHHHH
T ss_pred             CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
T ss_conf             8346999999999948898899988999999999985488778978689999


SCOP domain information

class: All alpha proteins
fold: MtlR-like
superfamily: MtlR-like
family: MtlR-like
domain: Putative transcriptional regulator YggD
species: Shigella flexneri [TaxId: 623]