RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= gi|254781184|ref|YP_003065597.1| hypothetical protein CLIBASIA_05455 [Candidatus Liberibacter asiaticus str. psy62] (78 letters) >gnl|CDD|39032 KOG3828, KOG3828, KOG3828, Uncharacterized conserved protein [Function unknown]. Length = 457 Score = 25.7 bits (56), Expect = 2.6 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%) Query: 5 INHLFINIFYPILWYTFPLMILISIQISIMISIRGR 40 +N LF+ YP+ WY P++ I S + GR Sbjct: 153 LNLLFL--SYPVGWYLPPILFYADIFRSELFGWLGR 186 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.335 0.148 0.467 Gapped Lambda K H 0.267 0.0736 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 1,042,292 Number of extensions: 46890 Number of successful extensions: 275 Number of sequences better than 10.0: 1 Number of HSP's gapped: 274 Number of HSP's successfully gapped: 18 Length of query: 78 Length of database: 6,263,737 Length adjustment: 48 Effective length of query: 30 Effective length of database: 5,226,505 Effective search space: 156795150 Effective search space used: 156795150 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.6 bits) S2: 51 (23.4 bits)