RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= gi|254781186|ref|YP_003065599.1| hypothetical protein CLIBASIA_05465 [Candidatus Liberibacter asiaticus str. psy62] (45 letters) >gnl|CDD|32422 COG2241, CobL, Precorrin-6B methylase 1 [Coenzyme metabolism]. Length = 210 Score = 25.2 bits (55), Expect = 4.4 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 3/42 (7%) Query: 3 HQYNPDAIV--LYANGIGAVTANYLENLNYSPIEKILGQRSS 42 + P I L NGIG LENL Y P E+I + Sbjct: 149 DDFGPAEIAKLLTENGIGDSRVTVLENLGY-PDERITDGTAE 189 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.314 0.131 0.369 Gapped Lambda K H 0.267 0.0786 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 516,335 Number of extensions: 15868 Number of successful extensions: 40 Number of sequences better than 10.0: 1 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 4 Length of query: 45 Length of database: 6,263,737 Length adjustment: 18 Effective length of query: 27 Effective length of database: 5,874,775 Effective search space: 158618925 Effective search space used: 158618925 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 51 (23.3 bits)