HHsearch alignment for GI: 254781187 and conserved domain: COG0514
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair].
Probab=90.53 E-value=0.69 Score=24.44 Aligned_cols=61 Identities=16% Similarity=0.151 Sum_probs=40.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHH
Q ss_conf 666842899999998888751245555541124776148867889999999999997089977999715379999999
Q gi|254781187|r 47 HFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTL 124 (367)
Q Consensus 47 ~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~l 124 (367)
T Consensus 14 Gy~~FR~gQ~evI~~~l~g~------------d~lvvmPTGgGKSlCyQiPAll~----~G-~TLVVSPLiSLM~DQV 74 (590)
T COG0514 14 GYASFRPGQQEIIDALLSGK------------DTLVVMPTGGGKSLCYQIPALLL----EG-LTLVVSPLISLMKDQV 74 (590)
T ss_pred CCCCCCCCHHHHHHHHHCCC------------CEEEECCCCCCCCHHHHHHHHHC----CC-CEEEECCHHHHHHHHH
T ss_conf 91303888899999996588------------67998538987106743678865----99-7899785688899999