HHsearch alignment for GI: 254781187 and conserved domain: KOG0350
>KOG0350 consensus.
Probab=94.73 E-value=0.17 Score=28.12 Aligned_cols=149 Identities=15% Similarity=0.041 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCC-EEEEEEECCCCCCHHHHHHHHHHHHHHHCCC--CEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 99999998888751245555541-1247761488678899999999999970899--77999715379999999999999
Q gi|254781187|r 54 WQLEFMEAVDVHCHSNVNNSNPT-IFKCAISAGRGIGKTTLNAWMMLWLISTRPG--MSIICIANSETQLKNTLWAEVSK 130 (367)
Q Consensus 54 wq~~~l~~~~~~~~~~~~~~~~~-~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~--~~v~~~A~t~~Q~~~~lw~ei~k 130 (367)
T Consensus 163 VQ~aVlp~ll~~~~~----p~~~r~rDIcV~ApTGSGKTLaY~iPIVQ~L~~R~v~~LRavVivPtr~L~~QV-~~~f~~ 237 (620)
T KOG0350 163 VQYAVLPSLLEEIRS----PPPSRPRDICVNAPTGSGKTLAYVIPIVQLLSSRPVKRLRAVVIVPTRELALQV-YDTFKR 237 (620)
T ss_pred HHHHHHHHHHHHHCC----CCCCCCCCEEEECCCCCCCEEEEHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHH-HHHHHH
T ss_conf 588888899986147----999887754775578988456651378999703873405799995479999999-999998
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CEEEEECCCCC-CCCCCCCCCCCCCCCEEEEECCCCCCHH
Q ss_conf 9986231211233332100012333221111345776---12662101354-4556521011358628999754559988
Q gi|254781187|r 131 WLSMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSK---HYTITCRTYSE-ERPDTFVGPHNTHGMAVFNDEASGTPDI 206 (367)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~a~~~~~-~~~ea~~g~h~~~~~l~ivDEAsgI~d~ 206 (367)
T Consensus 238 ~~~~tgL---~V~~~s----gq~sl~~E~~qL~~~~~~~~~DIlVaTPGRLVDHl~~~k~f~Lk~LrfLVIDEADRll~q 310 (620)
T KOG0350 238 LNSGTGL---AVCSLS----GQNSLEDEARQLASDPPECRIDILVATPGRLVDHLNNTKSFDLKHLRFLVIDEADRLLDQ 310 (620)
T ss_pred HCCCCCE---EEEECC----CCCCHHHHHHHHHCCCCCCCCCEEECCCHHHHHHCCCCCCCCHHHCEEEEECHHHHHHHH
T ss_conf 5668865---988601----454057899997259976543669737268888604898756445357775257789999
Q ss_pred HHHHHHHH
Q ss_conf 99998987
Q gi|254781187|r 207 INKSILGF 214 (367)
Q Consensus 207 i~e~i~g~ 214 (367)
T Consensus 311 sfQ~Wl~~ 318 (620)
T KOG0350 311 SFQEWLDT 318 (620)
T ss_pred HHHHHHHH
T ss_conf 99988999