HHsearch alignment for GI: 254781187 and conserved domain: PRK01172
>PRK01172 ski2-like helicase; Provisional.
Probab=98.18 E-value=0.0001 Score=47.92 Aligned_cols=160 Identities=12% Similarity=-0.023 Sum_probs=81.9
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 84289999999888875124555554112477614886788999999999999708997799971537999999999999
Q gi|254781187|r 50 QPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVS 129 (367)
Q Consensus 50 ~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~ 129 (367)
T Consensus 22 ~l~p~Q~ea~~~~~~gk------------NllvsaPTgsGKTlvAe~ai~~~l~--~~~k~iyi~P~kAL~~EK~-~~~~ 86 (674)
T PRK01172 22 ELYDHQRMAIEQLRKGE------------NVIVSVPTAAGKTLIAYSAIYETFL--AGLKSIYIVPLRSLAMEKY-EELS 86 (674)
T ss_pred CCCHHHHHHHHHHHCCC------------CEEEECCCCCCHHHHHHHHHHHHHH--HCCCEEEECCHHHHHHHHH-HHHH
T ss_conf 88989999999997799------------5999789998699999999999998--5897999877899999999-9999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCH----
Q ss_conf 9998623121123333210001233322111134577612662101354455652101135862899975455998----
Q gi|254781187|r 130 KWLSMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPD---- 205 (367)
Q Consensus 130 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d---- 205 (367)
T Consensus 87 ~~~~~g-~----~v~-------~~tGd~~~~~~~~~~~~-I~V~T~Ek~~sl~~~~~~~l~~v~~vViDEiH~i~d~~RG 153 (674)
T PRK01172 87 RLRSLG-M----RVK-------ISIGDYDDPPDFIKRYD-VVILTSEKADSLIHHDPYIINDVGLIVADEIHIIGDEDRG 153 (674)
T ss_pred HHHCCC-C----EEE-------EEECCCCCCCCCCCCCC-EEEECHHHHHHHHHCCCHHHCCCCEEEEECCEECCCCCCH
T ss_conf 887379-8----277-------88538889801025589-9998789999998649502213698998265250687724
Q ss_pred HHHHHHHHHHH--CCCCCEEEEEEECCCCCCCHHHH
Q ss_conf 89999898740--69882589998078999876887
Q gi|254781187|r 206 IINKSILGFFT--ELNPNRFWIMTSNTRRLNGWFYD 239 (367)
Q Consensus 206 ~i~e~i~g~Lt--~~~~~~~~i~igNP~r~~g~Fye 239 (367)
T Consensus 154 ~~lE~~l~kl~~l~~~~qi--IgLSATi~N~~~la~ 187 (674)
T PRK01172 154 PTLETVLSSARYVNPDARI--LALSATVSNANELAQ 187 (674)
T ss_pred HHHHHHHHHHHHCCCCEEE--EEECCCCCCHHHHHH
T ss_conf 9999999999853866079--971578689999998