HHsearch alignment for GI: 254781187 and conserved domain: PRK05896
>PRK05896 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.28 E-value=0.011 Score=35.43 Aligned_cols=138 Identities=14% Similarity=0.093 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999998888751245555541124776148867889999999999997089977999715379999999999999998
Q gi|254781187|r 54 WQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVSKWLS 133 (367)
Q Consensus 54 wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~k~~~ 133 (367)
T Consensus 20 GQe~iv~~L~nAI~~~Ria-HA----YLFsGPrGvGKTTlArifAkaLnC~~~~~~dpCg~C~--sC~-----~I~~--g 85 (613)
T PRK05896 20 GQELIKKILVNAILNNKLT-HA----YIFSGPRGIGKTSIAKIFAKAINCLNPKDGDCCNSCS--VCE-----SINT--N 85 (613)
T ss_pred CCHHHHHHHHHHHHCCCCC-CE----EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCH--HHH-----HHHC--C
T ss_conf 8299999999999849976-22----7755899848899999999996699999999888887--899-----9856--9
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 62312112333321000123332211113457761266210135445565210113586289997545599889999898
Q gi|254781187|r 134 MLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPDIINKSILG 213 (367)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d~i~e~i~g 213 (367)
T Consensus 86 ~h~Dv--iEId-----------------aasn~g--IDeIReLie~--~~~~P~~gkyK-V~IIDEah~Ln~~AaNALLK 141 (613)
T PRK05896 86 QSVDI--VELD-----------------AASNNG--VDEIRNIIDN--INYLPTTFKYK-VYIIDEAHMLSTSAWNALLK 141 (613)
T ss_pred CCCCE--EEEE-----------------CCCCCC--HHHHHHHHHH--HCCCCCCCCCE-EEEECCHHHCCHHHHHHHHH
T ss_conf 99986--8840-----------------655578--8999999997--08587579945-99981622179999999998
Q ss_pred HHHCCCCCEEEEEEEC
Q ss_conf 7406988258999807
Q gi|254781187|r 214 FFTELNPNRFWIMTSN 229 (367)
Q Consensus 214 ~Lt~~~~~~~~i~igN 229 (367)
T Consensus 142 tLEEPP~~viFIL~Tt 157 (613)
T PRK05896 142 TLEEPPKHVVFIFATT 157 (613)
T ss_pred HCCCCCCCCEEEEEEC
T ss_conf 5348987837999828