HHsearch alignment for GI: 254781187 and conserved domain: PRK05917
>PRK05917 DNA polymerase III subunit delta'; Validated.
Probab=94.14 E-value=0.41 Score=25.83 Aligned_cols=166 Identities=10% Similarity=-0.008 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 28999999988887512455555411247761488678899999999999970899779997153799999999999999
Q gi|254781187|r 52 HRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVSKW 131 (367)
Q Consensus 52 ~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~k~ 131 (367)
T Consensus 4 ~~We~-----L~~~i~~~Rl-~H----AyLf~Gp~G~GK~~~A~~~A~~LLc~~~p~~-------~~~--------i~~- 57 (290)
T PRK05917 4 AAWEA-----LLQRVRDQKV-PS----AILLHGQDLSNLSQYAYELASLILLESSPEA-------QYK--------ISQ- 57 (290)
T ss_pred HHHHH-----HHHHHHCCCC-CE----EEEEECCCCCCHHHHHHHHHHHHHCCCCCCH-------HHH--------HHH-
T ss_conf 49999-----9999983996-60----6876899986599999999999857899616-------889--------874-
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHH
Q ss_conf 98623121123333210001233322111134577612662101354455652101135862899975455998899998
Q gi|254781187|r 132 LSMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPDIINKSI 211 (367)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d~i~e~i 211 (367)
T Consensus 58 -~~HPD~~~i~pe~k~--------~~----~~Id~------iR~l~~--~i~~~p~~g~~-KV~IId~Ad~Mn~~AaNAL 115 (290)
T PRK05917 58 -KIHPDIHEFFPEGKG--------RL----HSIET------PRAIKK--QIWIHPYEANY-KIYIIHEADRMTLDAISAF 115 (290)
T ss_pred -CCCCCEEEECCCCCC--------CC----CCHHH------HHHHHH--HHCCCCCCCCC-EEEEECCHHHHCHHHHHHH
T ss_conf -689985996157778--------87----86789------999999--96418646882-6999756776389999999
Q ss_pred HHHHHCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHH
Q ss_conf 987406988258999807899987688754112235046752333288889889999996
Q gi|254781187|r 212 LGFFTELNPNRFWIMTSNTRRLNGWFYDIFNIPLEDWKRYQIDTRTVEGIDSGFHEGIIS 271 (367)
Q Consensus 212 ~g~Lt~~~~~~~~i~igNP~r~~g~Fye~~~~~~~~w~~~~~~~~d~p~~~~~~i~~~~~ 271 (367)
T Consensus 116 LKtLEEPP~~tvfILit~~~--~----~lLpTI~SRCQ~I~i~~~e~~~i~~e~~~~l~~ 169 (290)
T PRK05917 116 LKVLEDPPKHSVIILTSAKP--Q----RLPPTIRSRSLSIHIPGEEKTLPSKEDIAYLIR 169 (290)
T ss_pred HHHHCCCCCCEEEEEEECCH--H----HCCHHHHHCCCEEECCCCCCCCCCHHHHHHHHH
T ss_conf 99734798785999986992--5----482377633511677762013478899999999