HHsearch alignment for GI: 254781187 and conserved domain: PRK06090

>PRK06090 DNA polymerase III subunit delta'; Validated.
Probab=96.92  E-value=0.03  Score=32.75  Aligned_cols=134  Identities=10%  Similarity=0.118  Sum_probs=68.7

Q ss_pred             HHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             98888751245555541124776148867889999999999997089977999715379999999999999998623121
Q gi|254781187|r   60 EAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVSKWLSMLPHRH  139 (367)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~k~~~~~~~~~  139 (367)
T Consensus        13 ~~l~~~~~~~rl~-H----A~L~~g~~G~Gk~~la~~la~~LlC~~~~~~-~Cg~C~s------C-~l~~--~g~HPD~~   77 (319)
T PRK06090         13 QNWKSGLDAERIP-G----ALLLQSDEGLGVESLVELFSHALLCQNYQSE-ACGFCHS------C-ELMK--SGNHPDLH   77 (319)
T ss_pred             HHHHHHHHCCCCC-C----EEEEECCCCCCHHHHHHHHHHHHHCCCCCCC-CCCCCHH------H-HHHH--CCCCCCCE
T ss_conf             9999999869963-0----6766799985799999999999808999999-8877877------9-9987--58999823


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC
Q ss_conf             12333321000123332211113457761266210135445565210113586289997545599889999898740698
Q gi|254781187|r  140 WFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPDIINKSILGFFTELN  219 (367)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d~i~e~i~g~Lt~~~  219 (367)
T Consensus        78 ~i~pe~------------~~k~I~vd~IR~l~-----~~~~~~~~~g---~~-KV~iI~~ae~m~~~AaNALLKtLEEPp  136 (319)
T PRK06090         78 VIKPEK------------EGKSITVEQIRQCN-----RLAQESSQLG---GY-RLFVIEPADAMNESASNALLKTLEEPA  136 (319)
T ss_pred             EEECCC------------CCCCCCHHHHHHHH-----HHHHHCCCCC---CC-EEEEECCHHHCCHHHHHHHHHHHCCCC
T ss_conf             661233------------56768799999999-----9975452106---93-699981444349999999999842899


Q ss_pred             CCEEEEEEEC
Q ss_conf             8258999807
Q gi|254781187|r  220 PNRFWIMTSN  229 (367)
Q Consensus       220 ~~~~~i~igN  229 (367)
T Consensus       137 ~~t~fiL~t~  146 (319)
T PRK06090        137 PNCLFLLVTH  146 (319)
T ss_pred             CCEEEEEEEC
T ss_conf             8838998768