HHsearch alignment for GI: 254781187 and conserved domain: PRK06090
>PRK06090 DNA polymerase III subunit delta'; Validated.
Probab=96.92 E-value=0.03 Score=32.75 Aligned_cols=134 Identities=10% Similarity=0.118 Sum_probs=68.7
Q ss_pred HHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 98888751245555541124776148867889999999999997089977999715379999999999999998623121
Q gi|254781187|r 60 EAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVSKWLSMLPHRH 139 (367)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~k~~~~~~~~~ 139 (367)
T Consensus 13 ~~l~~~~~~~rl~-H----A~L~~g~~G~Gk~~la~~la~~LlC~~~~~~-~Cg~C~s------C-~l~~--~g~HPD~~ 77 (319)
T PRK06090 13 QNWKSGLDAERIP-G----ALLLQSDEGLGVESLVELFSHALLCQNYQSE-ACGFCHS------C-ELMK--SGNHPDLH 77 (319)
T ss_pred HHHHHHHHCCCCC-C----EEEEECCCCCCHHHHHHHHHHHHHCCCCCCC-CCCCCHH------H-HHHH--CCCCCCCE
T ss_conf 9999999869963-0----6766799985799999999999808999999-8877877------9-9987--58999823
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC
Q ss_conf 12333321000123332211113457761266210135445565210113586289997545599889999898740698
Q gi|254781187|r 140 WFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPDIINKSILGFFTELN 219 (367)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d~i~e~i~g~Lt~~~ 219 (367)
T Consensus 78 ~i~pe~------------~~k~I~vd~IR~l~-----~~~~~~~~~g---~~-KV~iI~~ae~m~~~AaNALLKtLEEPp 136 (319)
T PRK06090 78 VIKPEK------------EGKSITVEQIRQCN-----RLAQESSQLG---GY-RLFVIEPADAMNESASNALLKTLEEPA 136 (319)
T ss_pred EEECCC------------CCCCCCHHHHHHHH-----HHHHHCCCCC---CC-EEEEECCHHHCCHHHHHHHHHHHCCCC
T ss_conf 661233------------56768799999999-----9975452106---93-699981444349999999999842899
Q ss_pred CCEEEEEEEC
Q ss_conf 8258999807
Q gi|254781187|r 220 PNRFWIMTSN 229 (367)
Q Consensus 220 ~~~~~i~igN 229 (367)
T Consensus 137 ~~t~fiL~t~ 146 (319)
T PRK06090 137 PNCLFLLVTH 146 (319)
T ss_pred CCEEEEEEEC
T ss_conf 8838998768