HHsearch alignment for GI: 254781187 and conserved domain: PRK06305
>PRK06305 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.59 E-value=0.0029 Score=38.98 Aligned_cols=138 Identities=17% Similarity=0.100 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEE-EEECCCHHHHHHHHHHHHHHHH
Q ss_conf 999999988887512455555411247761488678899999999999970899779-9971537999999999999999
Q gi|254781187|r 54 WQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSI-ICIANSETQLKNTLWAEVSKWL 132 (367)
Q Consensus 54 wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v-~~~A~t~~Q~~~~lw~ei~k~~ 132 (367)
T Consensus 21 GQ~~vv~~L~nai~~~ri-~HA----yLF~GprGtGKTT~ArilAkaLnC~~~~~~~~pCg~C------~~-C~~I~~-- 86 (462)
T PRK06305 21 GQDAVVTVLKNALRFNRA-AHA----YLFSGIRGTGKTTLARIFAKALNCQNPTEDQEPCNQC------AI-CKEISS-- 86 (462)
T ss_pred CCHHHHHHHHHHHHCCCC-CCE----EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC------HH-HHHHHC--
T ss_conf 909999999999984997-623----4303899859999999999996799998888988766------88-899863--
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf 86231211233332100012333221111345776126621013544556521011358628999754559988999989
Q gi|254781187|r 133 SMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPDIINKSIL 212 (367)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d~i~e~i~ 212 (367)
T Consensus 87 --g~~~DViEiDa-----------------As~~g--VddIRel~e--~v~~~P~~~~yK-VyIIDEvhmLs~~AfNALL 142 (462)
T PRK06305 87 --GTSLDVIEIDG-----------------ASHRG--IEDIRQINE--TVLFTPSKSQYK-IYIIDEVHMLTKEAFNSLL 142 (462)
T ss_pred --CCCCCEEEECC-----------------CCCCC--HHHHHHHHH--HHCCCCCCCCEE-EEEEECHHHCCHHHHHHHH
T ss_conf --89998686435-----------------53446--689999997--710088677505-9998152117999999999
Q ss_pred HHHHCCCCCEEEEEEEC
Q ss_conf 87406988258999807
Q gi|254781187|r 213 GFFTELNPNRFWIMTSN 229 (367)
Q Consensus 213 g~Lt~~~~~~~~i~igN 229 (367)
T Consensus 143 KtLEEPP~~v~FILaTT 159 (462)
T PRK06305 143 KTLEEPPQHVKFFLATT 159 (462)
T ss_pred HHHHCCCCCEEEEEEEC
T ss_conf 98618987749999818