HHsearch alignment for GI: 254781187 and conserved domain: PRK07003
>PRK07003 DNA polymerase III subunits gamma and tau; Validated.
Probab=96.25 E-value=0.085 Score=29.98 Aligned_cols=135 Identities=17% Similarity=0.159 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999998888751245555541124776148867889999999999997089977999715379999999999999998
Q gi|254781187|r 54 WQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVSKWLS 133 (367)
Q Consensus 54 wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~k~~~ 133 (367)
T Consensus 20 GQ~~v~~~l~nal~~~rl~-ha----ylf~G~rGvGKTt~aRi~Ak~lnC~~~~~~~pc----g-~-C~~-C~~i~~--- 84 (816)
T PRK07003 20 GQEHVVRALTHALDGGRLH-HA----YLFTGTRGVGKTTLSRIFAKALNCETGVTSQPC----G-V-CRA-CREIDE--- 84 (816)
T ss_pred CCHHHHHHHHHHHHCCCCC-CE----EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC----C-C-CHH-HHHHHC---
T ss_conf 8499999999999709863-14----751178988888999999998678999998978----7-7-555-787755---
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 62312112333321000123332211113457761266210135445565210113586289997545599889999898
Q gi|254781187|r 134 MLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPDIINKSILG 213 (367)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d~i~e~i~g 213 (367)
T Consensus 85 ------------------g~~~d~iEiDa--AS~~~vd~~r~l~~~~--~y~p~~~r~-KvyiiDEvHmls~~afnalLK 141 (816)
T PRK07003 85 ------------------GRFVDYVEMDA--ASNRGVDEMAALLERA--VYAPVDARF-KVYMIDEVHMLTNHAFNAMLK 141 (816)
T ss_pred ------------------CCCCCEEEEEC--CCCCCHHHHHHHHHHC--CCCCCCCCE-EEEEEECHHHCCHHHHHHHHH
T ss_conf ------------------88775478635--5435768999999862--247866744-799984154339999999998
Q ss_pred HHHCCCCCEEEEE
Q ss_conf 7406988258999
Q gi|254781187|r 214 FFTELNPNRFWIM 226 (367)
Q Consensus 214 ~Lt~~~~~~~~i~ 226 (367)
T Consensus 142 tlEepP~hv~Fil 154 (816)
T PRK07003 142 TLEEPPPHVKFIL 154 (816)
T ss_pred HHCCCCCCEEEEE
T ss_conf 4037986648999