HHsearch alignment for GI: 254781187 and conserved domain: PRK07471
>PRK07471 DNA polymerase III subunit delta'; Validated.
Probab=96.95 E-value=0.0075 Score=36.47 Aligned_cols=160 Identities=16% Similarity=0.169 Sum_probs=79.8
Q ss_pred CCCCCHH-----HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHH-HH
Q ss_conf 6668428-----99999998888751245555541124776148867889999999999997089977999715379-99
Q gi|254781187|r 47 HFSQPHR-----WQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSET-QL 120 (367)
Q Consensus 47 ~~~~p~~-----wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~-Q~ 120 (367)
T Consensus 9 ~~p~P~~~~~liGqe~~~~~L~~a~~~grl~H-----A~Lf~Gp~GiGK~tlA~~~A~~ll~~~~~~~~~~~~~~~~l~~ 83 (363)
T PRK07471 9 ADPHPRETTALFGHAAAEAALLDAYRSGRLHH-----AWLIGGPQGIGKATLAYRMARFLLATPPPGGDAVFPPPASLAV 83 (363)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC-----EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCC
T ss_conf 99599982731681999999999998599764-----5876799981889999999999857999777776787053125
Q ss_pred --HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf --9999999999998623121123333210001233322--111134577612662101354455652101135862899
Q gi|254781187|r 121 --KNTLWAEVSKWLSMLPHRHWFEMQSLSLHPSGWYAEL--LEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVF 196 (367)
Q Consensus 121 --~~~lw~ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~i 196 (367)
T Consensus 84 ~~~~p~~r~i~----~~~hpdl~~i~------r~~d~k~~~~~~~I~Vd~------iR~l--~~~~~~~p~~g~~k-V~I 144 (363)
T PRK07471 84 DPDHPVARRIA----AGAHGGLLTLE------RSWNEKGKRLRTVITVDE------VRET--IGFFGLTAAEGGWR-VVI 144 (363)
T ss_pred CCCCCHHHHHH----CCCCCCEEEEE------CCCCCCCCCCCCCCCHHH------HHHH--HHHHCCCCCCCCCE-EEE
T ss_conf 87772899995----26999846676------200113332124453999------9999--99972485248966-999
Q ss_pred EECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECC
Q ss_conf 9754559988999989874069882589998078
Q gi|254781187|r 197 NDEASGTPDIINKSILGFFTELNPNRFWIMTSNT 230 (367)
Q Consensus 197 vDEAsgI~d~i~e~i~g~Lt~~~~~~~~i~igNP 230 (367)
T Consensus 145 Id~ad~mn~~aaNALLK~LEEPP~~t~fiLit~~ 178 (363)
T PRK07471 145 VDTADEMNANAANALLKVLEEPPARSLLLLVSHA 178 (363)
T ss_pred EECHHHHCHHHHHHHHHHHCCCCCCEEEEEEECC
T ss_conf 8687873889999999972158988389986399