HHsearch alignment for GI: 254781187 and conserved domain: PRK07940
>PRK07940 DNA polymerase III subunit delta'; Validated.
Probab=93.98 E-value=0.44 Score=25.63 Aligned_cols=138 Identities=15% Similarity=0.190 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHCCC-----------CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
Q ss_conf 9999998888751245-----------55554112477614886788999999999999708997799971537999999
Q gi|254781187|r 55 QLEFMEAVDVHCHSNV-----------NNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNT 123 (367)
Q Consensus 55 q~~~l~~~~~~~~~~~-----------~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~ 123 (367)
T Consensus 10 Qe~v~~~L~~A~~~~R~~~~~~~~~~~~~~HAy----LF~Gp~G~Gk~~~A~~~A~~l~C~~~~~~~-cg--~C~----~ 78 (395)
T PRK07940 10 QDAVVAELRAAARAARADSAHSAAAGSGMTHAW----LFTGPPGSGRSNAARAFAAALQCTDPGVPG-CG--ECR----A 78 (395)
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE----EEECCCCCCHHHHHHHHHHHHCCCCCCCCC-CC--CCH----H
T ss_conf 299999999999836343443333468766037----636899878899999999996699999999-98--787----8
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 99999999986231211233332100012333221111345776126621013544556521011358628999754559
Q gi|254781187|r 124 LWAEVSKWLSMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGT 203 (367)
Q Consensus 124 lw~ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI 203 (367)
T Consensus 79 C-~~i~--~g~hpDv~~i~p~~~~--------------i~id~------iR~l~--~~~~~~p~~~~~k-v~ii~~a~~m 132 (395)
T PRK07940 79 C-RTVL--AGTHPDVRVVVPEGLS--------------IGVDE------VREIV--QIAARRPTTGRWR-IVVIEDADRL 132 (395)
T ss_pred H-HHHH--CCCCCCEEEEECCCCC--------------CCHHH------HHHHH--HHHHHCCCCCCCE-EEEEECHHHH
T ss_conf 9-9987--6899871898268776--------------88999------99999--9985273037955-9998077874
Q ss_pred CHHHHHHHHHHHHCCCCCEEEEEEEC
Q ss_conf 98899998987406988258999807
Q gi|254781187|r 204 PDIINKSILGFFTELNPNRFWIMTSN 229 (367)
Q Consensus 204 ~d~i~e~i~g~Lt~~~~~~~~i~igN 229 (367)
T Consensus 133 ~~~a~NalLKtLEEPp~~~~fiL~t~ 158 (395)
T PRK07940 133 TERAANALLKAVEEPPPRTVWLLCAP 158 (395)
T ss_pred CHHHHHHHHHHHCCCCCCEEEEEEEC
T ss_conf 89999999985217888869998739