HHsearch alignment for GI: 254781187 and conserved domain: PRK08058
>PRK08058 DNA polymerase III subunit delta'; Validated.
Probab=97.25 E-value=0.013 Score=35.06 Aligned_cols=123 Identities=14% Similarity=0.160 Sum_probs=75.9
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC-------------------EE
Q ss_conf 84289999999888875124555554112477614886788999999999999708997-------------------79
Q gi|254781187|r 50 QPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGM-------------------SI 110 (367)
Q Consensus 50 ~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~-------------------~v 110 (367)
T Consensus 6 ~~~~~Q~~i~~~L~~~i~~~rl~-H----A~Lf~Gp~G~GK~~~A~~~A~~LlC~~~~~~~~Cg~C~~C~~~~~~~HPD~ 80 (329)
T PRK08058 6 QLTALQPIVVKMLQNSIAKNRLA-H----AYLFEGAKGTGKKATALWLAKSLFCLERNGVEPCGTCTNCKRIESGNHPDV 80 (329)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCC-C----EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCE
T ss_conf 88831899999999999859966-1----565578999889999999999973999999998878889999876999976
Q ss_pred EEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 99715379999999999999998623121123333210001233322111134577612662101354455652101135
Q gi|254781187|r 111 ICIANSETQLKNTLWAEVSKWLSMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNT 190 (367)
Q Consensus 111 ~~~A~t~~Q~~~~lw~ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~ 190 (367)
T Consensus 81 ~~i~p~~~~i~i---dqiR~L~~~~-----------------------------------------------~~~p~~g~ 110 (329)
T PRK08058 81 HLVAPDGQSIKK---DQIRYLKEEF-----------------------------------------------SKSGVESN 110 (329)
T ss_pred EEECCCCCCCCH---HHHHHHHHHH-----------------------------------------------CCCCCCCC
T ss_conf 774566140779---9999999996-----------------------------------------------43875788
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEE
Q ss_conf 86289997545599889999898740698825899980
Q gi|254781187|r 191 HGMAVFNDEASGTPDIINKSILGFFTELNPNRFWIMTS 228 (367)
Q Consensus 191 ~~~l~ivDEAsgI~d~i~e~i~g~Lt~~~~~~~~i~ig 228 (367)
T Consensus 111 ~K-V~II~~Ae~m~~~AaNALLKtLEEPp~~t~fIL~t 147 (329)
T PRK08058 111 KK-VYIIEHADKMTASAANSLLKFLEEPSGDTTAILLT 147 (329)
T ss_pred CE-EEEEECHHHHCHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 67-99973477629999999999864689786799872