HHsearch alignment for GI: 254781187 and conserved domain: PRK08058

>PRK08058 DNA polymerase III subunit delta'; Validated.
Probab=97.25  E-value=0.013  Score=35.06  Aligned_cols=123  Identities=14%  Similarity=0.160  Sum_probs=75.9

Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC-------------------EE
Q ss_conf             84289999999888875124555554112477614886788999999999999708997-------------------79
Q gi|254781187|r   50 QPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGM-------------------SI  110 (367)
Q Consensus        50 ~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~-------------------~v  110 (367)
T Consensus         6 ~~~~~Q~~i~~~L~~~i~~~rl~-H----A~Lf~Gp~G~GK~~~A~~~A~~LlC~~~~~~~~Cg~C~~C~~~~~~~HPD~   80 (329)
T PRK08058          6 QLTALQPIVVKMLQNSIAKNRLA-H----AYLFEGAKGTGKKATALWLAKSLFCLERNGVEPCGTCTNCKRIESGNHPDV   80 (329)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCC-C----EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCE
T ss_conf             88831899999999999859966-1----565578999889999999999973999999998878889999876999976


Q ss_pred             EEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             99715379999999999999998623121123333210001233322111134577612662101354455652101135
Q gi|254781187|r  111 ICIANSETQLKNTLWAEVSKWLSMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNT  190 (367)
Q Consensus       111 ~~~A~t~~Q~~~~lw~ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~  190 (367)
T Consensus        81 ~~i~p~~~~i~i---dqiR~L~~~~-----------------------------------------------~~~p~~g~  110 (329)
T PRK08058         81 HLVAPDGQSIKK---DQIRYLKEEF-----------------------------------------------SKSGVESN  110 (329)
T ss_pred             EEECCCCCCCCH---HHHHHHHHHH-----------------------------------------------CCCCCCCC
T ss_conf             774566140779---9999999996-----------------------------------------------43875788


Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEE
Q ss_conf             86289997545599889999898740698825899980
Q gi|254781187|r  191 HGMAVFNDEASGTPDIINKSILGFFTELNPNRFWIMTS  228 (367)
Q Consensus       191 ~~~l~ivDEAsgI~d~i~e~i~g~Lt~~~~~~~~i~ig  228 (367)
T Consensus       111 ~K-V~II~~Ae~m~~~AaNALLKtLEEPp~~t~fIL~t  147 (329)
T PRK08058        111 KK-VYIIEHADKMTASAANSLLKFLEEPSGDTTAILLT  147 (329)
T ss_pred             CE-EEEEECHHHHCHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf             67-99973477629999999999864689786799872