HHsearch alignment for GI: 254781187 and conserved domain: PRK08181
>PRK08181 transposase; Validated.
Probab=96.86 E-value=0.024 Score=33.31 Aligned_cols=128 Identities=14% Similarity=0.107 Sum_probs=68.9
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 84289999999888875124555554112477614886788999999999999708997799971537999999999999
Q gi|254781187|r 50 QPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVS 129 (367)
Q Consensus 50 ~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~ 129 (367)
T Consensus 87 ~i~~~~i~~L~~~~~fi~~~~--------Nvil~Gp~GtGKThLA~Alg~~--A~~~G~~V~f~~~~~------L~~~L~ 150 (269)
T PRK08181 87 MISKAQVMALAAGDSWLAKGA--------NLLLFGPPGGGKSHLAAAIGLA--LIENGWRVLFTRTTD------LVQKLQ 150 (269)
T ss_pred CCCHHHHHHHHCCCHHHHCCC--------EEEEECCCCCCHHHHHHHHHHH--HHHCCCEEEEEEHHH------HHHHHH
T ss_conf 989999999965675886487--------0899899998788999999999--998799399978999------999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCC-----
Q ss_conf 999862312112333321000123332211113457761266210135445565210113586289997545599-----
Q gi|254781187|r 130 KWLSMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTP----- 204 (367)
Q Consensus 130 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~----- 204 (367)
T Consensus 151 ~a~~~~--------------------------------~~-----------~~~~~~l--~~~dLLIiDe~G~~~~~~~~ 185 (269)
T PRK08181 151 VARREL--------------------------------QL-----------ESAIAKL--DKFDLLILDDLAYVTKDQAE 185 (269)
T ss_pred HHHHCC--------------------------------CH-----------HHHHHHH--HCCCEEEEHHCCCCCCCHHH
T ss_conf 977558--------------------------------39-----------9999997--44460122010566799899
Q ss_pred -HHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHCC
Q ss_conf -8899998987406988258999807899987688754112
Q gi|254781187|r 205 -DIINKSILGFFTELNPNRFWIMTSNTRRLNGWFYDIFNIP 244 (367)
Q Consensus 205 -d~i~e~i~g~Lt~~~~~~~~i~igNP~r~~g~Fye~~~~~ 244 (367)
T Consensus 186 ~~~lf~lI~~Ry---e~~S-~IIT--Sn~~~~~W~~~f~D~ 220 (269)
T PRK08181 186 TSVLFELISARY---ERRS-ILIT--ANQPFGEWNRVFPDP 220 (269)
T ss_pred HHHHHHHHHHHH---CCCC-EEEE--CCCCHHHHHHHCCCH
T ss_conf 999999999985---7888-8998--899977887753868