HHsearch alignment for GI: 254781187 and conserved domain: PRK08691
>PRK08691 DNA polymerase III subunits gamma and tau; Validated.
Probab=96.61 E-value=0.052 Score=31.30 Aligned_cols=134 Identities=16% Similarity=0.126 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999998888751245555541124776148867889999999999997089977999715379999999999999998
Q gi|254781187|r 54 WQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVSKWLS 133 (367)
Q Consensus 54 wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~k~~~ 133 (367)
T Consensus 20 GQ~~v~~~L~nal~~~rl-~ha----ylf~G~rGvGKTt~Ari~Ak~lNC~~~~~~~pCg~------C~~-C~~i~~--- 84 (704)
T PRK08691 20 GQEHVVKALQNALDEGRL-HHA----YLLTGTRGVGKTTIARILAKSLNCENAQHGEPCGV------CQS-CTQIDA--- 84 (704)
T ss_pred CCHHHHHHHHHHHHHCCC-CCE----EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC------CHH-HHHHHC---
T ss_conf 869999999999981997-523----75027898788899999999967999999997877------776-787855---
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 62312112333321000123332211113457761266210135445565210113586289997545599889999898
Q gi|254781187|r 134 MLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPDIINKSILG 213 (367)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d~i~e~i~g 213 (367)
T Consensus 85 -g-----------------~~~D~~EiD--aAs~~~vdd~R~l~~~--~~y~P~~~~yK-VyiiDEvhmLs~~afNAlLK 141 (704)
T PRK08691 85 -G-----------------RYVDLLEID--AASNTGIDNIREVLEN--AQYAPTAGKYK-VYIIDEVHMLSKSAFNAMLK 141 (704)
T ss_pred -C-----------------CCCCEEEEE--CCCCCCHHHHHHHHHH--CCCCCCCCCEE-EEEEECHHHCCHHHHHHHHH
T ss_conf -8-----------------998747742--4544588999999985--34688678535-99983154438999999998
Q ss_pred HHHCCCCCEEEE
Q ss_conf 740698825899
Q gi|254781187|r 214 FFTELNPNRFWI 225 (367)
Q Consensus 214 ~Lt~~~~~~~~i 225 (367)
T Consensus 142 tLEEPP~~v~Fi 153 (704)
T PRK08691 142 TLEEPPEHVKFI 153 (704)
T ss_pred HHCCCCCCEEEE
T ss_conf 614797560899