HHsearch alignment for GI: 254781187 and conserved domain: PRK08769

>PRK08769 DNA polymerase III subunit delta'; Validated.
Probab=97.21  E-value=0.0062  Score=36.97  Aligned_cols=147  Identities=13%  Similarity=0.162  Sum_probs=77.4

Q ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             42899999998888751245555541124776148867889999999999997089977999715379999999999999
Q gi|254781187|r   51 PHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVSK  130 (367)
Q Consensus        51 p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~k  130 (367)
T Consensus         5 ~~PWq~~~~~~L~~~i~~~rl~H-----A~Lf~Gp~G~GK~~~A~~~A~~llc~~~~~~~~~~~------~~~----i~-   68 (319)
T PRK08769          5 FSPWQQRAFDQTVAALDAGRLGH-----GLLICGPEGLGKRAVALALAEHVLASGPDPALAQRT------RQL----IA-   68 (319)
T ss_pred             CCCCCHHHHHHHHHHHHCCCCCC-----EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH------HHH----HH-
T ss_conf             58776899999999997699420-----687589998789999999999983799797654338------899----96-


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHH
Q ss_conf             99862312112333321000123332211113457761266210135445565210113586289997545599889999
Q gi|254781187|r  131 WLSMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPDIINKS  210 (367)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d~i~e~  210 (367)
T Consensus        69 -~g~HPD~~~i~~~-----~~~~-~~k~k~~I~IdqiR~l~~~--------~~~~p~~g~~-KV~IId~Ad~mn~~AaNa  132 (319)
T PRK08769         69 -AGTHPDLQLVSFI-----PNRT-GDKLRTEIVIEQVREISQK--------LALTPQYGIA-QVVIVDPADAINRSACNA  132 (319)
T ss_pred             -CCCCCCEEEEECC-----CCCC-CCCCCCCCCHHHHHHHHHH--------HHHCCCCCCC-EEEEECCHHHCCHHHHHH
T ss_conf             -6899896877534-----4445-4311234869999999999--------6137202795-699980667528999999


Q ss_pred             HHHHHHCCCCCEEEEEEEC
Q ss_conf             8987406988258999807
Q gi|254781187|r  211 ILGFFTELNPNRFWIMTSN  229 (367)
Q Consensus       211 i~g~Lt~~~~~~~~i~igN  229 (367)
T Consensus       133 lLK~LEEPp~~~~~iL~~~  151 (319)
T PRK08769        133 LLKTLEEPSPGRYLWLISA  151 (319)
T ss_pred             HHHHHCCCCCCEEEEEEEC
T ss_conf             9998227998848999869