HHsearch alignment for GI: 254781187 and conserved domain: PRK08853
>PRK08853 DNA polymerase III subunits gamma and tau; Validated.
Probab=95.82 E-value=0.14 Score=28.75 Aligned_cols=134 Identities=19% Similarity=0.159 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999998888751245555541124776148867889999999999997089977999715379999999999999998
Q gi|254781187|r 54 WQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVSKWLS 133 (367)
Q Consensus 54 wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~k~~~ 133 (367)
T Consensus 20 GQ~~v~~~L~nal~~~rl~-ha----ylf~G~rGvGKTt~ARi~Ak~lNC~~~~~~~pcg~------C~~-C~~i~~--- 84 (717)
T PRK08853 20 GQSHVLTALENALAHNRLH-HA----YLFSGTRGVGKTTIGRLFAKGLNCETGITSTPCGQ------CAT-CKEIDE--- 84 (717)
T ss_pred CCHHHHHHHHHHHHCCCCC-CE----EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC------CCC-HHHHHC---
T ss_conf 8599999999999709974-05----76108898889899999999867899999997888------702-676744---
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 62312112333321000123332211113457761266210135445565210113586289997545599889999898
Q gi|254781187|r 134 MLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPDIINKSILG 213 (367)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d~i~e~i~g 213 (367)
T Consensus 85 ------------------g~~~d~~EiD--aAs~~~vdd~rel~~-~-~~y~p~~~~yK-vyiiDEvHmls~~afnAlLK 141 (717)
T PRK08853 85 ------------------GRFVDLLEID--AASRTKVEDTRELLD-N-VQYKPARGRFK-VYLIDEVHMLSRHSFNALLK 141 (717)
T ss_pred ------------------CCCCCEEEEC--CCCCCCHHHHHHHHH-H-CCCCCCCCCEE-EEEEECHHHCCHHHHHHHHH
T ss_conf ------------------7877524540--565678899999998-5-55488778547-99983054438999999987
Q ss_pred HHHCCCCCEEEE
Q ss_conf 740698825899
Q gi|254781187|r 214 FFTELNPNRFWI 225 (367)
Q Consensus 214 ~Lt~~~~~~~~i 225 (367)
T Consensus 142 tlEEPP~hv~Fi 153 (717)
T PRK08853 142 TLEEPPEYVKFL 153 (717)
T ss_pred HHCCCCCCEEEE
T ss_conf 603787564899