HHsearch alignment for GI: 254781187 and conserved domain: PRK10590

>PRK10590 ATP-dependent RNA helicase RhlE; Provisional.
Probab=97.98  E-value=0.00016  Score=46.67  Aligned_cols=138  Identities=16%  Similarity=0.053  Sum_probs=77.8

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCC-------CCEEEEECCCH
Q ss_conf             43666842899999998888751245555541124776148867889999999999997089-------97799971537
Q gi|254781187|r   45 LEHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRP-------GMSIICIANSE  117 (367)
Q Consensus        45 ~~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~-------~~~v~~~A~t~  117 (367)
T Consensus        18 ~~G~~~PTpIQ~~aIP~iL~Gr------------Dvl~~A~TGSGKTlAflLPil~~l~~~~~~~~~~~~~~aLIL~PTR   85 (457)
T PRK10590         18 EQGYREPTPIQQQAIPAVLEGR------------DLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTR   85 (457)
T ss_pred             HCCCCCCCHHHHHHHHHHHCCC------------CEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHH
T ss_conf             7799999999999999997799------------8899889811899999999999986367654456882499976879


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf             99999999999999986231211233332100012333221111345776126621013544556521011358628999
Q gi|254781187|r  118 TQLKNTLWAEVSKWLSMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFN  197 (367)
Q Consensus       118 ~Q~~~~lw~ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~iv  197 (367)
T Consensus        86 ELA~Qi-~~~~~~l~~~~~~~~------~~~~---Gg~~~~~q~~~l~~~~dIlVaTPGRLldl~~~~~~~l~~v~~lVl  155 (457)
T PRK10590         86 ELAAQI-GENVRDYSKYLNIRS------LVVF---GGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVL  155 (457)
T ss_pred             HHHHHH-HHHHHHHCCCCCCEE------EEEE---CCCCHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCCCCCEEEEE
T ss_conf             999999-999997425589459------9997---997775999986189998998928889888626776575239998


Q ss_pred             ECCCCCC
Q ss_conf             7545599
Q gi|254781187|r  198 DEASGTP  204 (367)
Q Consensus       198 DEAsgI~  204 (367)
T Consensus       156 DEAD~mL  162 (457)
T PRK10590        156 DEADRML  162 (457)
T ss_pred             ECCHHHH
T ss_conf             3705651