HHsearch alignment for GI: 254781187 and conserved domain: PRK11448

>PRK11448 hsdR type I restriction enzyme EcoKI subunit R; Provisional.

Probab=97.17  E-value=0.018  Score=34.11  Aligned_cols=72  Identities=17%  Similarity=0.221  Sum_probs=52.4

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCH---HHH
Q ss_conf             44366684289999999888875124555554112477614886788999999999999708997799971537---999
Q gi|254781187|r   44 PLEHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSE---TQL  120 (367)
Q Consensus        44 ~~~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~---~Q~  120 (367)
T Consensus       410 ~~~~~i~lR~YQ~~AI~~v~~a~~~~~r-------raLl~MATGTGKTrtaial~~rLlk~~~~kRILFLvDR~~L~~QA  482 (1126)
T PRK11448        410 PFDYELGLRYYQEDAIQAVEKALANGQR-------EILLAMATGTGKTRTAIALMYRLLKAKRFKRILFLVDRRALGEQA  482 (1126)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHCCCC-------CEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHH
T ss_conf             9877777868899999999999980985-------468872488858989999999999658767257985658999999


Q ss_pred             HH
Q ss_conf             99
Q gi|254781187|r  121 KN  122 (367)
Q Consensus       121 ~~  122 (367)
T Consensus       483 ~~  484 (1126)
T PRK11448        483 LD  484 (1126)
T ss_pred             HH
T ss_conf             99