HHsearch alignment for GI: 254781187 and conserved domain: PRK12377
>PRK12377 putative replication protein; Provisional.
Probab=96.63 E-value=0.051 Score=31.36 Aligned_cols=60 Identities=18% Similarity=0.217 Sum_probs=39.2
Q ss_pred CCCCCCCHHHHHHHHH---HHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 4366684289999999---88887512455555411247761488678899999999999970899779997
Q gi|254781187|r 45 LEHFSQPHRWQLEFME---AVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICI 113 (367)
Q Consensus 45 ~~~~~~p~~wq~~~l~---~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~ 113 (367)
T Consensus 73 f~ny~~~~~~~~~a~~~a~~~~~~F~~~-------~~NlIf~G~pGtGKTHLA~AIg~~a~~--~G~sVlF~ 135 (248)
T PRK12377 73 FANYQVQNDGQRYALSQAKSIADELMTG-------CTNFVFSGKPGTGKNHLAAAIGNRLLA--KGRSVIVV 135 (248)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCC-------CCEEEEECCCCCCHHHHHHHHHHHHHH--CCCEEEEE
T ss_conf 3456457878999999999999987318-------860899899998788999999999998--79969998