HHsearch alignment for GI: 254781187 and conserved domain: pfam05127
>pfam05127 DUF699 Putative ATPase (DUF699). This putative domain is about 350 amino acid residues long and appears to have a P-loop motif, suggesting this is an ATPase. This domain is often associated with pfam00583. This domain is found in isolation in the uncharacterized protein HI1254 from Haemophilus influenzae.
Probab=96.73 E-value=0.043 Score=31.82 Aligned_cols=85 Identities=21% Similarity=0.153 Sum_probs=47.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
Q ss_conf 99779997153799999999999999986231211233332100012333221111345776126621013544556521
Q gi|254781187|r 106 PGMSIICIANSETQLKNTLWAEVSKWLSMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFV 185 (367)
Q Consensus 106 ~~~~v~~~A~t~~Q~~~~lw~ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~ 185 (367)
T Consensus 12 ~~~~I~VTAP~~~nv~-~lf~~~~~~L~~lg~~~~--------~-----~~~~~~~~~~~~-------~~i~f~~Pd~l~ 70 (160)
T pfam05127 12 GYSRILVTAPSPANVQ-TLFEFAIKGLDALGYKPK--------K-----REGIIASLRGNG-------QRIRFIAPDELL 70 (160)
T ss_pred CCCEEEEECCCHHHHH-HHHHHHHHHHHHCCCCCC--------C-----CCCCEEEEECCC-------EEEEEECCHHHH
T ss_conf 9973999799989999-999999999986386434--------5-----655047875287-------689996808986
Q ss_pred CCCCCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf 011358628999754559988999989
Q gi|254781187|r 186 GPHNTHGMAVFNDEASGTPDIINKSIL 212 (367)
Q Consensus 186 g~h~~~~~l~ivDEAsgI~d~i~e~i~ 212 (367)
T Consensus 71 ~~~-~~~DllvVDEAAaIP~p~L~~ll 96 (160)
T pfam05127 71 KLP-PQADLLVVDEAAAIPLPLLKQLL 96 (160)
T ss_pred HCC-CCCCEEEEEHHHCCCHHHHHHHH
T ss_conf 167-87768997324218889999998