HHsearch alignment for GI: 254781187 and conserved domain: smart00488

>smart00488 DEXDc2 DEAD-like helicases superfamily.
Probab=98.03  E-value=4.9e-05  Score=49.84  Aligned_cols=80  Identities=24%  Similarity=0.431  Sum_probs=57.9

Q ss_pred             HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHH-HHHHHHHHHHHC---CCC
Q ss_conf             5430146688844366684289999999888875124555554112477614886788999-999999999708---997
Q gi|254781187|r   33 MRFFPWGIKGKPLEHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTL-NAWMMLWLISTR---PGM  108 (367)
Q Consensus        33 ~~~~~w~~~~~~~~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~-~a~~~lw~~~~~---~~~  108 (367)
T Consensus         2 ~~~FPy-----------~py~~Q~e~m~~v~~~l~~~~--------~~llEaPTGtGKTlalL~~al~~~~~~~~~~~~~   62 (289)
T smart00488        2 LFYFPY-----------EPYPIQYEFMEELKRVLDRGK--------IGILESPTGTGKTLSLLCLTLTWLRSFPERIQKI   62 (289)
T ss_pred             EECCCC-----------CCCHHHHHHHHHHHHHHHCCC--------EEEEECCCCHHHHHHHHHHHHHHHHHCHHCCCCC
T ss_conf             327899-----------999899999999999997499--------7999899965189999999999999670102456


Q ss_pred             EEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf             799971537999999999999999
Q gi|254781187|r  109 SIICIANSETQLKNTLWAEVSKWL  132 (367)
Q Consensus       109 ~v~~~A~t~~Q~~~~lw~ei~k~~  132 (367)
T Consensus        63 ki~~~t~t~~~~~~~~-~elr~~~   85 (289)
T smart00488       63 KLIYLSRTVSEIEKRL-EELRKLM   85 (289)
T ss_pred             EEEEEECCHHHHHHHH-HHHHHHC
T ss_conf             1687615378899999-9998632