HHsearch results for GI: 254781187 and protein with PDBid: 1a5t_A
>1a5t_A Delta prime, HOLB; zinc finger, DNA replication; 2.20A {Escherichia coli K12} SCOP: a.80.1.1 c.37.1.20 PDB: 1jr3_E* 1xxh_E* 1xxi_E* 3glf_E* 3glg_E* 3glh_E* 3gli_E*
Probab=97.24 E-value=0.0025 Score=38.02 Aligned_cols=143 Identities=13% Similarity=0.157 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf 89999999888875124555554112477614886788999999999999708997799971537999999999999999
Q gi|254781187|r 53 RWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVSKWL 132 (367)
Q Consensus 53 ~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~k~~ 132 (367)
+||.+..+.+....+.+... | -+.+.+..|+||++++-+++-+.+|..+...-.|- +-.. +..+..
T Consensus 5 pw~~~~~~~L~~~~~~~~l~-h----a~L~~G~~G~GK~~~a~~~a~~llc~~~~~~~~c~--~c~~-----c~~i~~-- 70 (334)
T 1a5t_A 5 PWLRPDFEKLVASYQAGRGH-H----ALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG--HCRG-----CQLMQA-- 70 (334)
T ss_dssp GGGHHHHHHHHHHHHTTCCC-S----EEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCS--CSHH-----HHHHHH--
T ss_pred CCCHHHHHHHHHHHHCCCCC-E----EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCC--CCHH-----HHHHHC--
T ss_conf 01099999999999869956-0----36358999988999999999997087998888886--6689-----999975--
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf 86231211233332100012333221111345776126621013544556521011358628999754559988999989
Q gi|254781187|r 133 SMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPDIINKSIL 212 (367)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d~i~e~i~ 212 (367)
...|+-+.+.... ....++.+.-....... .-.... |.. -.+|+|||.........++.
T Consensus 71 ~~hpd~~~i~~~~------------~~~~i~i~~iR~l~~~~-----~~~~~~---~~~-kiiiI~~ad~m~~~a~nalL 129 (334)
T 1a5t_A 71 GTHPDYYTLAPEK------------GKNTLGVDAVREVTEKL-----NEHARL---GGA-KVVWVTDAALLTDAAANALL 129 (334)
T ss_dssp TCCTTEEEECCCT------------TCSSBCHHHHHHHHHHT-----TSCCTT---SSC-EEEEESCGGGBCHHHHHHHH
T ss_pred CCCCCEEEECCHH------------CCCCCCHHHHHHHHHHH-----HHCCCC---CCC-EEEEECCHHHCCHHHHHHHH
T ss_conf 7999745432121------------04657899999999986-----426446---895-79997784544865689999
Q ss_pred HHHHCCCCCEEEEEEECC
Q ss_conf 874069882589998078
Q gi|254781187|r 213 GFFTELNPNRFWIMTSNT 230 (367)
Q Consensus 213 g~Lt~~~~~~~~i~igNP 230 (367)
.+|-.+....+.+++.|-
T Consensus 130 K~lEeP~~~~~fil~t~~ 147 (334)
T 1a5t_A 130 KTLEEPPAETWFFLATRE 147 (334)
T ss_dssp HHHTSCCTTEEEEEEESC
T ss_pred HHHHCCCCCCEEEEECCC
T ss_conf 998659733134320487