HHsearch results for GI: 254781187 and protein with PDBid: 1gm5_A

>1gm5_A RECG; helicase, replication restart; HET: DNA ADP; 3.24A {Thermotoga maritima} SCOP: a.24.21.1 b.40.4.9 c.37.1.19 c.37.1.19
Probab=97.17  E-value=0.007  Score=35.30  Aligned_cols=79  Identities=11%  Similarity=0.074  Sum_probs=58.7

Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             84289999999888875124555554112477614886788999999999999708997799971537999999999999
Q gi|254781187|r   50 QPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVS  129 (367)
Q Consensus        50 ~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~  129 (367)
                      .++.-|.+++.+|...+..+.-     | ++.|.|.-|+|||.+....++..+..  +..+++++||..=+.+. ...++
T Consensus       368 ~lT~~Q~~~~~~i~~d~~~~~~-----~-~~Llqa~TGSGKTlv~llpil~~i~~--g~q~lilaPTreLA~Q~-~~~~k  438 (780)
T 1gm5_A          368 KLTNAQKRAHQEIRNDMISEKP-----M-NRLLQGDVGSGKTVVAQLAILDNYEA--GFQTAFMVPTSILAIQH-YRRTV  438 (780)
T ss_dssp             CCCHHHHHHHHHHHHHHHSSSC-----C-CCEEECCSSSSHHHHHHHHHHHHHHH--TSCEEEECSCHHHHHHH-HHHHH
T ss_pred             CCCHHHHHHHHHHHHHHCCCCC-----C-EEEEECCCCCCCHHHHHHHHHHHHHC--CCCEEEEECCHHHHHHH-HHHHH
T ss_conf             7898899999999998618987-----5-28998178974609999999999863--89559992528999999-99998


Q ss_pred             HHHHHCCC
Q ss_conf             99986231
Q gi|254781187|r  130 KWLSMLPH  137 (367)
Q Consensus       130 k~~~~~~~  137 (367)
                      ++...+..
T Consensus       439 ~l~~~~~i  446 (780)
T 1gm5_A          439 ESFSKFNI  446 (780)
T ss_dssp             HHHTCSSC
T ss_pred             HHHCCCCC
T ss_conf             76115783