HHsearch results for GI: 254781187 and protein with PDBid: 1iqp_A
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=96.59 E-value=0.033 Score=31.20 Aligned_cols=119 Identities=15% Similarity=0.119 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEE-EEECCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999988887512455555411247761488678899999999999970899779-99715379999999999999998
Q gi|254781187|r 55 QLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSI-ICIANSETQLKNTLWAEVSKWLS 133 (367)
Q Consensus 55 q~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v-~~~A~t~~Q~~~~lw~ei~k~~~ 133 (367)
|.++.+.+...++++.. | .+...++.|+|||+++-.++--..+....... .+.+...+....+. ........
T Consensus 30 ~~~~~~~L~~~~~~~~~---p---~lll~Gp~G~GKTtla~~lak~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 102 (327)
T 1iqp_A 30 QEHIVKRLKHYVKTGSM---P---HLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERGINVIR-EKVKEFAR 102 (327)
T ss_dssp CHHHHHHHHHHHHHTCC---C---EEEEESCTTSSHHHHHHHHHHHHHGGGHHHHEEEEETTCHHHHHTTH-HHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCC---C---EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHH-HHHHHHHH
T ss_conf 69999999999977999---8---69878989999999999999997640147771134454556648999-99999986
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 62312112333321000123332211113457761266210135445565210113586289997545599889999898
Q gi|254781187|r 134 MLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPDIINKSILG 213 (367)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d~i~e~i~g 213 (367)
. ....+....++++||+.........++..
T Consensus 103 ~--------------------------------------------------~~~~~~~~~viiide~~~~~~~~~~~Ll~ 132 (327)
T 1iqp_A 103 T--------------------------------------------------KPIGGASFKIIFLDEADALTQDAQQALRR 132 (327)
T ss_dssp S--------------------------------------------------CCGGGCSCEEEEEETGGGSCHHHHHHHHH
T ss_pred C--------------------------------------------------CCCCCCCEEEEEEECCCCCCHHHHHHHHH
T ss_conf 3--------------------------------------------------12368872699986766465768999999
Q ss_pred HHHCCCCCEEEEEEECC
Q ss_conf 74069882589998078
Q gi|254781187|r 214 FFTELNPNRFWIMTSNT 230 (367)
Q Consensus 214 ~Lt~~~~~~~~i~igNP 230 (367)
.+-........+++.+.
T Consensus 133 ~le~~~~~~~~i~~~~~ 149 (327)
T 1iqp_A 133 TMEMFSSNVRFILSCNY 149 (327)
T ss_dssp HHHHTTTTEEEEEEESC
T ss_pred HHHCCCCCEEEEECCCC
T ss_conf 88505775145523686