HHsearch results for GI: 254781187 and protein with PDBid: 1iqp_A

>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=96.59  E-value=0.033  Score=31.20  Aligned_cols=119  Identities=15%  Similarity=0.119  Sum_probs=66.6

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEE-EEECCCHHHHHHHHHHHHHHHHH
Q ss_conf             99999988887512455555411247761488678899999999999970899779-99715379999999999999998
Q gi|254781187|r   55 QLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSI-ICIANSETQLKNTLWAEVSKWLS  133 (367)
Q Consensus        55 q~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v-~~~A~t~~Q~~~~lw~ei~k~~~  133 (367)
                      |.++.+.+...++++..   |   .+...++.|+|||+++-.++--..+....... .+.+...+....+. ........
T Consensus        30 ~~~~~~~L~~~~~~~~~---p---~lll~Gp~G~GKTtla~~lak~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  102 (327)
T 1iqp_A           30 QEHIVKRLKHYVKTGSM---P---HLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERGINVIR-EKVKEFAR  102 (327)
T ss_dssp             CHHHHHHHHHHHHHTCC---C---EEEEESCTTSSHHHHHHHHHHHHHGGGHHHHEEEEETTCHHHHHTTH-HHHHHHHH
T ss_pred             CHHHHHHHHHHHHCCCC---C---EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHH-HHHHHHHH
T ss_conf             69999999999977999---8---69878989999999999999997640147771134454556648999-99999986


Q ss_pred             HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf             62312112333321000123332211113457761266210135445565210113586289997545599889999898
Q gi|254781187|r  134 MLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPDIINKSILG  213 (367)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d~i~e~i~g  213 (367)
                      .                                                  ....+....++++||+.........++..
T Consensus       103 ~--------------------------------------------------~~~~~~~~~viiide~~~~~~~~~~~Ll~  132 (327)
T 1iqp_A          103 T--------------------------------------------------KPIGGASFKIIFLDEADALTQDAQQALRR  132 (327)
T ss_dssp             S--------------------------------------------------CCGGGCSCEEEEEETGGGSCHHHHHHHHH
T ss_pred             C--------------------------------------------------CCCCCCCEEEEEEECCCCCCHHHHHHHHH
T ss_conf             3--------------------------------------------------12368872699986766465768999999


Q ss_pred             HHHCCCCCEEEEEEECC
Q ss_conf             74069882589998078
Q gi|254781187|r  214 FFTELNPNRFWIMTSNT  230 (367)
Q Consensus       214 ~Lt~~~~~~~~i~igNP  230 (367)
                      .+-........+++.+.
T Consensus       133 ~le~~~~~~~~i~~~~~  149 (327)
T 1iqp_A          133 TMEMFSSNVRFILSCNY  149 (327)
T ss_dssp             HHHHTTTTEEEEEEESC
T ss_pred             HHHCCCCCEEEEECCCC
T ss_conf             88505775145523686