HHsearch results for GI: 254781187 and protein with PDBid: 1q0u_A

>1q0u_A Bstdead; DEAD protein, RNA binding protein; 1.85A {Geobacillus stearothermophilus} SCOP: c.37.1.19
Probab=97.43  E-value=0.00069  Score=41.48  Aligned_cols=66  Identities=14%  Similarity=0.077  Sum_probs=48.5

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCC-CCEEEEECCCHHHHHHH
Q ss_conf             3666842899999998888751245555541124776148867889999999999997089-97799971537999999
Q gi|254781187|r   46 EHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRP-GMSIICIANSETQLKNT  123 (367)
Q Consensus        46 ~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~-~~~v~~~A~t~~Q~~~~  123 (367)
                      .+|..|++-|...+..|-+..            .+.|.|..|+|||.....-++..+.... +.+.++..++...+...
T Consensus        22 ~g~~~pt~iQ~~aip~il~g~------------dvii~a~TGsGKTlayllp~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (219)
T 1q0u_A           22 LRFYKPTEIQERIIPGALRGE------------SMVGQSQTGTGKTHAYLLPIMEKIKPERAEVQAVITAPTRELATQI   88 (219)
T ss_dssp             TTCCSCCHHHHHHHHHHHHTC------------CEEEECCSSHHHHHHHHHHHHHHCCTTSCSCCEEEECSSHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHCCC------------CEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCHHHHHHHH
T ss_conf             899999999999999996799------------8899817999840577635554022345676530111205677777