HHsearch results for GI: 254781187 and protein with PDBid: 1q0u_A
>1q0u_A Bstdead; DEAD protein, RNA binding protein; 1.85A {Geobacillus stearothermophilus} SCOP: c.37.1.19
Probab=97.43 E-value=0.00069 Score=41.48 Aligned_cols=66 Identities=14% Similarity=0.077 Sum_probs=48.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCC-CCEEEEECCCHHHHHHH
Q ss_conf 3666842899999998888751245555541124776148867889999999999997089-97799971537999999
Q gi|254781187|r 46 EHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRP-GMSIICIANSETQLKNT 123 (367)
Q Consensus 46 ~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~-~~~v~~~A~t~~Q~~~~ 123 (367)
.+|..|++-|...+..|-+.. .+.|.|..|+|||.....-++..+.... +.+.++..++...+...
T Consensus 22 ~g~~~pt~iQ~~aip~il~g~------------dvii~a~TGsGKTlayllp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (219)
T 1q0u_A 22 LRFYKPTEIQERIIPGALRGE------------SMVGQSQTGTGKTHAYLLPIMEKIKPERAEVQAVITAPTRELATQI 88 (219)
T ss_dssp TTCCSCCHHHHHHHHHHHHTC------------CEEEECCSSHHHHHHHHHHHHHHCCTTSCSCCEEEECSSHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHCCC------------CEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCHHHHHHHH
T ss_conf 899999999999999996799------------8899817999840577635554022345676530111205677777