HHsearch results for GI: 254781187 and protein with PDBid: 1s2m_A
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=97.39 E-value=0.0016 Score=39.24 Aligned_cols=67 Identities=16% Similarity=0.085 Sum_probs=45.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH-HCCCCEEEEECCCHHHHHHHH
Q ss_conf 3666842899999998888751245555541124776148867889999999999997-089977999715379999999
Q gi|254781187|r 46 EHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLIS-TRPGMSIICIANSETQLKNTL 124 (367)
Q Consensus 46 ~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~-~~~~~~v~~~A~t~~Q~~~~l 124 (367)
.+|..|++-|.+++..+-... .+.|.|+.|+|||.....-++-... ......++++.++...+....
T Consensus 39 ~g~~~pt~iQ~~ai~~il~g~------------dviv~apTGsGKTlaf~lp~l~~~~~~~~~~~~li~~~~~~~~~q~~ 106 (400)
T 1s2m_A 39 AGFEKPSPIQEEAIPVAITGR------------DILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTS 106 (400)
T ss_dssp TTCCSCCHHHHHHHHHHHHTC------------CEEEECCTTSCHHHHHHHHHHHHCCTTSCSCCEEEECSSHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHCCC------------CEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHH
T ss_conf 799999999999999998599------------88998999883789999999996443147851899935389888999