HHsearch results for GI: 254781187 and protein with PDBid: 1w36_D
>1w36_D RECD, exodeoxyribonuclease V alpha chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 PDB: 3k70_D*
Probab=98.00 E-value=0.00036 Score=43.19 Aligned_cols=148 Identities=20% Similarity=0.167 Sum_probs=77.9
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH--CCCCEEEEECCCHHHHHHHHHHH
Q ss_conf 8428999999988887512455555411247761488678899999999999970--89977999715379999999999
Q gi|254781187|r 50 QPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLIST--RPGMSIICIANSETQLKNTLWAE 127 (367)
Q Consensus 50 ~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~--~~~~~v~~~A~t~~Q~~~~lw~e 127 (367)
+...||.+++..... ++ -..|.+|=|+|||+++..++.+++.. .++.+|+++|||.+-+..+. ..
T Consensus 149 ~~~~~Q~~Av~~al~---~~---------~~lI~GgpGTGKTtti~~~i~~l~~~~~~~~~~Ill~ApTgkAa~~L~-e~ 215 (608)
T 1w36_D 149 DEINWQKVAAAVALT---RR---------ISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLT-ES 215 (608)
T ss_dssp TSCCHHHHHHHHHHT---BS---------EEEEECCTTSTHHHHHHHHHHHHHHTCSSCCCCEEEEBSSHHHHHHHH-HH
T ss_pred CCCHHHHHHHHHHHC---CC---------EEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH-HH
T ss_conf 998899999999970---99---------089993899729999999999999974157984999948399999999-99
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHH
Q ss_conf 99999862312112333321000123332211113457761266210135445565210113586289997545599889
Q gi|254781187|r 128 VSKWLSMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPDII 207 (367)
Q Consensus 128 i~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d~i 207 (367)
+.+-......... ........ .......++...+.. ... .+.. +.....++++||++.++...
T Consensus 216 ~~~~~~~i~~~~~---~~~~~~~~---~~t~h~ll~~~~~~~-----~~~-~~~~-----~~~~~~~~ivDE~sm~~~~~ 278 (608)
T 1w36_D 216 LGKALRQLPLTDE---QKKRIPED---ASTLHRLLGAQPGSQ-----RLR-HHAG-----NPLHLDVLVVDEASMIDLPM 278 (608)
T ss_dssp HTHHHHHSSCCSC---CCCSCSCC---CBTTTSCC-----------------CTT-----SCCSCSEEEECSGGGCBHHH
T ss_pred HHHHHHHCCCCCH---HHHHCCCH---HHHHHHHHHCCCCCH-----HHH-HHHH-----HHHHHHHHHHHHHHHHHHHH
T ss_conf 8767740462200---33322321---556999974165303-----667-6564-----11122367767886541998
Q ss_pred HHHHHHHHHCCCCCEEEEEEECC
Q ss_conf 99989874069882589998078
Q gi|254781187|r 208 NKSILGFFTELNPNRFWIMTSNT 230 (367)
Q Consensus 208 ~e~i~g~Lt~~~~~~~~i~igNP 230 (367)
+..+..++.. +.+. +..|.+
T Consensus 279 ~~~~~~a~~~-~~~l--~l~gD~ 298 (608)
T 1w36_D 279 MSRLIDALPD-HARV--IFLGDR 298 (608)
T ss_dssp HHHHHHTCCT-TCEE--EEEECT
T ss_pred HHHHHHHHHC-CCEE--EEECCH
T ss_conf 8778776205-6479--983330