HHsearch results for GI: 254781187 and protein with PDBid: 1xti_A
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=96.48 E-value=0.011 Score=34.01 Aligned_cols=78 Identities=17% Similarity=0.227 Sum_probs=49.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHC-CCCEEEEECCCHHHHHHHH
Q ss_conf 366684289999999888875124555554112477614886788999999999999708-9977999715379999999
Q gi|254781187|r 46 EHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTR-PGMSIICIANSETQLKNTL 124 (367)
Q Consensus 46 ~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~-~~~~v~~~A~t~~Q~~~~l 124 (367)
.+|..|++.|.+++..+-++ . .+.|.|+.|+|||.+...-++-.+... ....+++++||...+.++
T Consensus 26 ~gf~~~t~iQ~~ai~~~l~g----~--------dviv~apTGsGKTl~y~lp~l~~l~~~~~~~~~~il~pt~~l~~q~- 92 (391)
T 1xti_A 26 CGFEHPSEVQHECIPQAILG----M--------DVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQI- 92 (391)
T ss_dssp HSCCSCCHHHHHHHHHHTTT----C--------CEEEECSSCSSHHHHHHHHHHHHCCCCTTCCCEEEECSCHHHHHHH-
T ss_pred CCCCCCCHHHHHHHHHHHCC----C--------CEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHH-
T ss_conf 79999999999999999749----9--------8899899984599999999999634157871599984789999878-
Q ss_pred HHHHHHHHHHCC
Q ss_conf 999999998623
Q gi|254781187|r 125 WAEVSKWLSMLP 136 (367)
Q Consensus 125 w~ei~k~~~~~~ 136 (367)
...+++.....+
T Consensus 93 ~~~~~~l~~~~~ 104 (391)
T 1xti_A 93 SKEYERFSKYMP 104 (391)
T ss_dssp HHHHHHHTTTCT
T ss_pred HHHHHHHHHHCC
T ss_conf 999999985378