HHsearch results for GI: 254781187 and protein with PDBid: 1z3i_X
>1z3i_X Similar to RAD54-like; recombination ATPase helicase, recombination/DNA binding complex; 3.00A {Danio rerio} SCOP: c.37.1.19 c.37.1.19
Probab=97.57 E-value=0.0021 Score=38.57 Aligned_cols=171 Identities=16% Similarity=0.128 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCC-----CCEEEEECCCHHHHHHHHHH
Q ss_conf 2899999998888751245555541124776148867889999999999997089-----97799971537999999999
Q gi|254781187|r 52 HRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRP-----GMSIICIANSETQLKNTLWA 126 (367)
Q Consensus 52 ~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~-----~~~v~~~A~t~~Q~~~~lw~ 126 (367)
++.|.+-++=+.+....... ...+...++--=|.|||..+-+++..++...+ ..+++|++|+ .+....-.
T Consensus 57 ~phQ~~gv~~l~~~~~~~~~---~~~~G~iLADemGLGKTlqaia~i~~l~~~~~~~~~~~~~~LIV~P~--sl~~qW~~ 131 (644)
T 1z3i_X 57 RPHQREGVKFLWDCVTGRRI---ENSYGCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPS--SLVRNWYN 131 (644)
T ss_dssp CHHHHHHHHHHHHHHTTSSS---TTCCEEEECCCTTSCHHHHHHHHHHHHHHCCTTSSCSCSCEEEEECH--HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCC---CCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECH--HHHHHHHH
T ss_conf 39999999999985650033---58887798638981797999999999998575326878808999788--99999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE-CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCH
Q ss_conf 99999986231211233332100012333221111345776126621-01354455652101135862899975455998
Q gi|254781187|r 127 EVSKWLSMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITC-RTYSEERPDTFVGPHNTHGMAVFNDEASGTPD 205 (367)
Q Consensus 127 ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d 205 (367)
|+++|...........-.. ........................+.. ...+. ..+. ++.....++|+|||..+.+
T Consensus 132 E~~k~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~i~sy~~~~~-~~~~---l~~~~~~~vI~DEaH~~kn 206 (644)
T 1z3i_X 132 EVGKWLGGRVQPVAIDGGS-KDEIDSKLVNFISQQGMRIPTPILIISYETFRL-HAEV---LHKGKVGLVICDEGHRLKN 206 (644)
T ss_dssp HHHHHHGGGCCEEEECSSC-HHHHHHHHHHHHCCCSSCCSCCEEEEEHHHHHH-HTTT---TTTSCCCEEEETTGGGCCT
T ss_pred HHHHHCCCCEEEEEEECCC-HHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHH-HHHH---HHCCCCCEEEEECCCCCCC
T ss_conf 9999738761599984896-888999999877642766676589975999997-8999---8538988799412010344
Q ss_pred HHHHHHHHHHHCCCCCEEEEEEECCCCC
Q ss_conf 8999989874069882589998078999
Q gi|254781187|r 206 IINKSILGFFTELNPNRFWIMTSNTRRL 233 (367)
Q Consensus 206 ~i~e~i~g~Lt~~~~~~~~i~igNP~r~ 233 (367)
..-.......... .+..|+++|+|-.+
T Consensus 207 ~~s~~~~~~~~~~-~~~~~lltgTP~~n 233 (644)
T 1z3i_X 207 SDNQTYLALNSMN-AQRRVLISGTPIQN 233 (644)
T ss_dssp TCHHHHHHHHHHC-CSEEEEECSSCSGG
T ss_pred CCCHHHHHHHHCC-CHHHHHHCCCCCCC
T ss_conf 0219999987413-02543330661128