HHsearch results for GI: 254781187 and protein with PDBid: 1z63_A
>1z63_A Helicase of the SNF2/RAD54 hamily; protein-DNA complex, hydrolase/DNA complex complex; 3.00A {Sulfolobus solfataricus} SCOP: c.37.1.19 c.37.1.19 PDB: 1z6a_A
Probab=98.00 E-value=0.00011 Score=46.31 Aligned_cols=154 Identities=12% Similarity=0.022 Sum_probs=83.3
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 42899999998888751245555541124776148867889999999999997089977999715379999999999999
Q gi|254781187|r 51 PHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVSK 130 (367)
Q Consensus 51 p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~k 130 (367)
-+++|.+.++-+....+.+. ...++-.=|.|||..+.+++..+....+..+++|++|+. +....-.|+++
T Consensus 38 L~~~Q~~gv~~~~~~~~~~~--------g~iLADe~GlGKT~~ai~~~~~~~~~~~~~~~LIV~P~s--l~~qW~~Ei~k 107 (500)
T 1z63_A 38 LRPYQIKGFSWMRFMNKLGF--------GICLADDMGLGKTLQTIAVFSDAKKENELTPSLVICPLS--VLKNWEEELSK 107 (500)
T ss_dssp CCHHHHHHHHHHHHHHHTTC--------CEEECCCTTSCHHHHHHHHHHHHHHTTCCSSEEEEECST--THHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCC--------CEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEECHH--HHHHHHHHHHH
T ss_conf 70999999999998253799--------889870896519899999999999848999789998689--99999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHH
Q ss_conf 99862312112333321000123332211113457761266210135445565210113586289997545599889999
Q gi|254781187|r 131 WLSMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPDIINKS 210 (367)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d~i~e~ 210 (367)
|...+..... . .............++...... ......+.....++|+|||..+.+.....
T Consensus 108 ~~~~~~v~~~---~------------~~~~~~~~~~~~iii~~~~~~----~~~~~~~~~~~~~vI~DEaH~~~~~~~~~ 168 (500)
T 1z63_A 108 FAPHLRFAVF---H------------EDRSKIKLEDYDIILTTYAVL----LRDTRLKEVEWKYIVIDEAQNIKNPQTKI 168 (500)
T ss_dssp HCTTSCEEEC---S------------SSTTSCCGGGSSEEEEEHHHH----TTCHHHHTCCEEEEEEETGGGGSCTTSHH
T ss_pred HCCCCEEEEE---C------------CCHHHHHHCCCCEEEEEHHHH----HHHHHHHHCCCCEEEEEHHHHHCCCHHHH
T ss_conf 7798758751---4------------851342003587899843666----65667651564378761433221302678
Q ss_pred HHHHHHCCCCCEEEEEEECCCCCC
Q ss_conf 898740698825899980789998
Q gi|254781187|r 211 ILGFFTELNPNRFWIMTSNTRRLN 234 (367)
Q Consensus 211 i~g~Lt~~~~~~~~i~igNP~r~~ 234 (367)
..... ....+..|+++|||-.+.
T Consensus 169 ~~~~~-~~~~~~rllLTgTP~~n~ 191 (500)
T 1z63_A 169 FKAVK-ELKSKYRIALTGTPIENK 191 (500)
T ss_dssp HHHHH-TSCEEEEEEECSSCSTTC
T ss_pred HHHHH-HHCCCEEEEEECCCCCCC
T ss_conf 88887-420574798511734587