HHsearch results for GI: 254781187 and protein with PDBid: 2oxc_A
>2oxc_A Probable ATP-dependent RNA helicase DDX20; DEAD, structural genomics, structural genomics consortium, SGC, hydrolase; HET: ADP; 1.30A {Homo sapiens} PDB: 3b7g_A*
Probab=97.83 E-value=0.00013 Score=46.02 Aligned_cols=76 Identities=16% Similarity=0.134 Sum_probs=54.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCC-CCEEEEECCCHHHHHHH
Q ss_conf 43666842899999998888751245555541124776148867889999999999997089-97799971537999999
Q gi|254781187|r 45 LEHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRP-GMSIICIANSETQLKNT 123 (367)
Q Consensus 45 ~~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~-~~~v~~~A~t~~Q~~~~ 123 (367)
-.+|..|++.|.+++..|-.+ . .+.+.|+.|+|||.....-++....... ..++++++|+...+..+
T Consensus 41 ~~g~~~pt~iQ~~aip~il~g----~--------dvli~a~TGsGKTlay~lp~l~~~~~~~~~~~~lil~p~~~l~~q~ 108 (230)
T 2oxc_A 41 AAGFERPSPVQLKAIPLGRCG----L--------DLIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQI 108 (230)
T ss_dssp HTTCCSCCHHHHHHHHHHHTT----C--------CEEEECCTTSSHHHHHHHHHHHHCCTTSCSCCEEEECSSHHHHHHH
T ss_pred HCCCCCCCHHHHHHHHHHHCC----C--------CEEEEECCCCCCCEEEECCCHHHHHCCCCCCEEEECCCCHHHHHHH
T ss_conf 879999999999999998579----9--------8999927987642023043023320035776234407999999988
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999998
Q gi|254781187|r 124 LWAEVSKWLS 133 (367)
Q Consensus 124 lw~ei~k~~~ 133 (367)
..+++++..
T Consensus 109 -~~~~~~l~~ 117 (230)
T 2oxc_A 109 -HSVITAIGI 117 (230)
T ss_dssp -HHHHHHHTT
T ss_pred -HHHHHHHHH
T ss_conf -899887764