HHsearch results for GI: 254781187 and protein with PDBid: 2p6r_A
>2p6r_A Afuhel308 helicase; protein-DNA complex, SF2 helicase, archaeal helicase, DNA repair,, DNA binding protein/DNA complex; 3.00A {Archaeoglobus fulgidus} SCOP: a.4.5.43 a.289.1.2 c.37.1.19 c.37.1.19 PDB: 2p6u_A
Probab=98.09 E-value=5.3e-06 Score=54.44 Aligned_cols=63 Identities=16% Similarity=0.046 Sum_probs=44.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
Q ss_conf 66684289999999888875124555554112477614886788999999999999708997799971537999999
Q gi|254781187|r 47 HFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNT 123 (367)
Q Consensus 47 ~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~ 123 (367)
++..+.+||.+++..+.++ . .+.|.++.|+|||.++...++-.+. .+.++++++|+..-+.+.
T Consensus 22 Gi~~L~p~Q~~ai~~i~~g----~--------nvlv~aPTGsGKTlia~l~il~~~~--~~~r~l~i~P~~aL~~q~ 84 (702)
T 2p6r_A 22 GIEELFPPQAEAVEKVFSG----K--------NLLLAMPTAAGKTLLAEMAMVREAI--KGGKSLYVVPLRALAGEK 84 (702)
T ss_dssp ---CCCCCCHHHHHHHTTC----S--------CEEEECSSHHHHHHHHHHHHHHHHH--TTCCEEEEESSHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHCC----C--------CEEEECCCCCHHHHHHHHHHHHHHH--CCCCEEEECCHHHHHHHH
T ss_conf 9999999999999999839----9--------9999839985399999999999986--399799991889999999