HHsearch results for GI: 254781187 and protein with PDBid: 2pl3_A
>2pl3_A Probable ATP-dependent RNA helicase DDX10; DEAD, structural genomics, structural genomics consortium, SGC, hydrolase; HET: ADP; 2.15A {Homo sapiens}
Probab=97.51 E-value=0.00069 Score=41.48 Aligned_cols=76 Identities=14% Similarity=0.042 Sum_probs=56.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCC-----CCEEEEECCCHHHH
Q ss_conf 3666842899999998888751245555541124776148867889999999999997089-----97799971537999
Q gi|254781187|r 46 EHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRP-----GMSIICIANSETQL 120 (367)
Q Consensus 46 ~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~-----~~~v~~~A~t~~Q~ 120 (367)
.+|+.|++-|.+++..+-.+. .+.+.|..|+|||.....-++..+.... +.++++++||...+
T Consensus 43 ~g~~~pt~iQ~~aip~il~g~------------dvl~~a~TGSGKTlayllp~l~~i~~~~~~~~~~~~~lil~pt~~la 110 (236)
T 2pl3_A 43 AQYRLVTEIQKQTIGLALQGK------------DVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELA 110 (236)
T ss_dssp TTCCBCCHHHHHHHHHHHTTC------------CEEEECCTTSCHHHHHHHHHHHHHHHTTCCGGGCCCEEEECSSHHHH
T ss_pred CCCCCCCHHHHHHHHHHHCCC------------CEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHH
T ss_conf 799999999999999997799------------88998069997028886799875442003345684699975889999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999986
Q gi|254781187|r 121 KNTLWAEVSKWLSM 134 (367)
Q Consensus 121 ~~~lw~ei~k~~~~ 134 (367)
.++ ....++....
T Consensus 111 ~q~-~~~~~~l~~~ 123 (236)
T 2pl3_A 111 YQT-FEVLRKVGKN 123 (236)
T ss_dssp HHH-HHHHHHHTTT
T ss_pred HHH-HHHHHHHHCC
T ss_conf 745-5776653025