HHsearch results for GI: 254781187 and protein with PDBid: 3b6e_A
>3b6e_A Interferon-induced helicase C domain-containing protein 1; DECH, DEXD/H RNA-binding helicase, innate immunity, IFIH1, structural genomics; 1.60A {Homo sapiens}
Probab=98.01 E-value=7.6e-06 Score=53.48 Aligned_cols=72 Identities=14% Similarity=0.109 Sum_probs=51.1
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH----CCCCEEEEECCCHHHHHHHHH
Q ss_conf 8428999999988887512455555411247761488678899999999999970----899779997153799999999
Q gi|254781187|r 50 QPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLIST----RPGMSIICIANSETQLKNTLW 125 (367)
Q Consensus 50 ~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~----~~~~~v~~~A~t~~Q~~~~lw 125 (367)
.+|+||.|++..+.++ .++.|.++.|+|||.++...+...+.. .+..++++++|+..-+.+. +
T Consensus 33 ~lr~~Q~eai~~~~~~------------~n~iv~~~TGsGKT~~~~~~~~~~l~~~~~~~~~~~~lvv~p~~~L~~q~-~ 99 (216)
T 3b6e_A 33 QLRPYQMEVAQPALEG------------KNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLLVEQL-F 99 (216)
T ss_dssp CCCHHHHHHHHHHHTT------------CCEEEECSCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEESSHHHHHHH-H
T ss_pred CCCHHHHHHHHHHHHC------------CCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHH-H
T ss_conf 9899999999999958------------99899918998489999999999987321236786089980819999999-9
Q ss_pred HHHHHHHHH
Q ss_conf 999999986
Q gi|254781187|r 126 AEVSKWLSM 134 (367)
Q Consensus 126 ~ei~k~~~~ 134 (367)
.+..+....
T Consensus 100 ~~~~~~~~~ 108 (216)
T 3b6e_A 100 RKEFQPFLK 108 (216)
T ss_dssp HHTHHHHHT
T ss_pred HHHHHHHCC
T ss_conf 999987203