HHsearch results for GI: 254781187 and protein with PDBid: 3crv_A
>3crv_A XPD/RAD3 related DNA helicase; XPD helicase DNA repair cancer aging, hydrolase; HET: FLC; 2.00A {Sulfolobus acidocaldarius} PDB: 3crw_1*
Probab=97.53 E-value=0.00035 Score=43.29 Aligned_cols=67 Identities=16% Similarity=0.224 Sum_probs=49.9
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHH--HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH
Q ss_conf 84289999999888875124555554112477614886788999--9999999997089977999715379999999999
Q gi|254781187|r 50 QPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTL--NAWMMLWLISTRPGMSIICIANSETQLKNTLWAE 127 (367)
Q Consensus 50 ~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~--~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~e 127 (367)
.||+.|.+++..|.+.+.++. .+.+-||-|+|||.. ++++ . .+.+|++..+|..|..... .|
T Consensus 3 ~~R~~Q~~~~~~i~~~l~~~~--------~~~iEApTGtGKTlayL~~al-~------~~~~vii~T~T~~lq~Q~~-~e 66 (551)
T 3crv_A 3 KLRDWQEKLKDKVIEGLRNNF--------LVALNAPTGSGKTLFSLLVSL-E------VKPKVLFVVRTHNEFYPIY-RD 66 (551)
T ss_dssp SCCHHHHHHHHHHHHHHHTTC--------EEEEECCTTSSHHHHHHHHHH-H------HCSEEEEEESSGGGHHHHH-HH
T ss_pred CCCHHHHHHHHHHHHHHHCCC--------EEEEECCCHHHHHHHHHHHHH-H------HCCCEEEECCCHHHHHHHH-HH
T ss_conf 748899999999999994599--------399987983799999999999-9------7997999988799999999-99
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254781187|r 128 VSKWL 132 (367)
Q Consensus 128 i~k~~ 132 (367)
+.+..
T Consensus 67 l~~l~ 71 (551)
T 3crv_A 67 LTKIR 71 (551)
T ss_dssp HTTCC
T ss_pred HHHHH
T ss_conf 99998