HHsearch alignment for GI: 254781188 and conserved domain: pfam01527
>pfam01527 Transposase_8 Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.
Probab=96.00 E-value=0.012 Score=38.90 Aligned_cols=42 Identities=29% Similarity=0.488 Sum_probs=37.9
Q ss_pred CCCCHHHHHHHHHHH-HCCHHHHHHHHCCCCCCHHHHHHHHHCC
Q ss_conf 445899999999998-5892389996158898888999998339
Q gi|254781188|r 19 IYYSPELFAGILDQV-ANGKALGHVLRKVGMPKYSTFYRWIKKD 61 (185)
Q Consensus 19 i~Ys~Eiad~Ic~rI-A~GeSLr~ICkd~gMPs~sTV~rWL~kd 61 (185)
T Consensus 5 rrys~efK~~~V~~~~~~g~sv~~var~~gi-~~~~l~~W~k~~ 47 (75)
T pfam01527 5 RRYSEEFKARAVKESLEPGASVSELAREHGV-SPATLYKWRKKY 47 (75)
T ss_pred CCCCHHHHHHHHHHHHHCCCCHHHHHHHHCC-CHHHHHHHHHHH
T ss_conf 8899999999999998099849999999895-999999999998