HHsearch results for GI: 254781188 and protein with PDBid: 1hlv_A

>1hlv_A CENP-B, major centromere autoantigen B; helix-turn-helix, protein-DNA complex, riken structural genomics/proteomics initiative, RSGI; 2.50A {Homo sapiens} SCOP: a.4.1.7 a.4.1.7 PDB: 1bw6_A

Probab=92.54  E-value=0.22  Score=28.95  Aligned_cols=51  Identities=16%  Similarity=0.204  Sum_probs=42.2

Q ss_pred             CCCHHHHHHHHHHHHCCH--HHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHH
Q ss_conf             458999999999985892--3899961588988889999983398999999999
Q gi|254781188|r   20 YYSPELFAGILDQVANGK--ALGHVLRKVGMPKYSTFYRWIKKDLKLQEAYTEA   71 (185)
Q Consensus        20 ~Ys~Eiad~Ic~rIA~Ge--SLr~ICkd~gMPs~sTV~rWL~kdeEfreqYa~A   71 (185)
                      .||.+.--+||..+-.|.  +.++|++..|+| .+|+.+|++..+++...+...
T Consensus         7 ~~t~~~K~~vi~~~~~~~~~~~~~iAk~fgv~-~sTi~~~~k~k~~~~~~~~~~   59 (131)
T 1hlv_A            7 QLTFREKSRIIQEVEENPDLRKGEIARRFNIP-PSTLSTILKNKRAILASERKY   59 (131)
T ss_dssp             CCCHHHHHHHHHHHHHCTTSCHHHHHHHHTCC-HHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHC
T ss_conf             18999999999999977888899999998919-999999992479999999715