HHsearch results for GI: 254781188 and protein with PDBid: 1k78_A

>1k78_A Paired box protein PAX5; paired domain, ETS domain, transcription factor, transcription/DNA complex; 2.25A {Homo sapiens} SCOP: a.4.1.5 a.4.1.5 PDB: 1mdm_A 6pax_A

Probab=92.29  E-value=0.11  Score=30.94  Aligned_cols=42  Identities=7%  Similarity=0.096  Sum_probs=38.7

Q ss_pred             CCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCHH
Q ss_conf             5899999999998589238999615889888899999833989
Q gi|254781188|r   21 YSPELFAGILDQVANGKALGHVLRKVGMPKYSTFYRWIKKDLK   63 (185)
Q Consensus        21 Ys~Eiad~Ic~rIA~GeSLr~ICkd~gMPs~sTV~rWL~kdeE   63 (185)
                      |+.++-..|++.+.+|.|.++|++..++ +.+||.+|+....+
T Consensus        33 Ls~dlR~rIV~~~~~G~s~r~IArrf~V-S~stV~kii~r~re   74 (149)
T 1k78_A           33 LPDVVRQRIVELAHQGVRPCDISRQLRV-SHGCVSKILGRYYE   74 (149)
T ss_dssp             CCHHHHHHHHHHHHTTCCHHHHHHHHTC-CHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHCCCCHHHHHHHHCC-CHHHHHHHHHHHHH
T ss_conf             9899999999999969999999998894-99999999999998