HHSEARCH alignment of GI: 254781188 and SCOP domain: d2jn6a1

Alignment
>d2jn6a1 a.4.1.19 (A:1-89) Uncharacterized protein Cgl2762 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=95.55  E-value=0.0054  Score=38.16  Aligned_cols=40  Identities=25%  Similarity=0.457  Sum_probs=35.7

Q ss_pred             CCCHHHHHHHHHHHH--CCHHHHHHHHCCCCCCHHHHHHHHHC
Q ss_conf             458999999999985--89238999615889888899999833
Q gi|254781188|r   20 YYSPELFAGILDQVA--NGKALGHVLRKVGMPKYSTFYRWIKK   60 (185)
Q Consensus        20 ~Ys~Eiad~Ic~rIA--~GeSLr~ICkd~gMPs~sTV~rWL~k   60 (185)
                      .|++|+=.++....-  .|.|++.|+++.|+ +.+|+++|++.
T Consensus         5 ~Ys~EfK~~aV~l~~~~~g~s~~~vA~~lGI-s~~tl~~W~k~   46 (89)
T d2jn6a1           5 TYSEEFKRDAVALYENSDGASLQQIANDLGI-NRVTLKNWIIK   46 (89)
T ss_dssp             CCCHHHHHHHHHHHTTGGGSCHHHHHHHHTS-CHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHCCCCCHHHHHHHHCC-CHHHHHHHHHH
T ss_conf             8999999999999998299859999999798-98899999999


SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Cgl2762-like
domain: Uncharacterized protein Cgl2762
species: Corynebacterium glutamicum [TaxId: 1718]