HHsearch results for GI: 254781190 and protein with PDBid: 3m1m_A
>3m1m_A ORF904; primase, polymerase, plasmid, replication; 1.85A {Sulfolobus islandicus}
Probab=99.56 E-value=6.7e-15 Score=103.69 Aligned_cols=100 Identities=11% Similarity=0.143 Sum_probs=62.0
Q ss_pred HHHHHCCCCC-CEEEEECCCCCCEEEEEEECCCHHHHHHHH--HHHHHHCCCCEEEECCCCCEEEEEECCCCCC-CCCCC
Q ss_conf 3787518616-889970788488899995489846789999--9776408986298678895399984474312-43357
Q gi|254781190|r 3 ATDVDHYVYN-GFGILCGIGTHPVYAFDVDVLDEQVVDRFN--NEFQSCCGKPISRVGQAPKTLMLFRMQETNL-KKQKS 78 (233)
Q Consensus 3 a~~~~~~p~~-giGi~~G~~s~~l~~iDiD~~d~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~lfr~~~~~~-~~~~~ 78 (233)
..+++.+|.+ ||||+||+ +|+++||||.. .....+. .-+..++..+....+..||.|+||+.++.+. +.+..
T Consensus 51 ~~Ww~~~P~a~NIGI~TG~--sGLVVLDiD~k--eg~~~~~~~~~L~~li~~T~~VkTPSGG~HLYfr~~e~Pp~k~~p~ 126 (335)
T 3m1m_A 51 QRFLKMIEEGYNYAIPGGQ--KGLVILDFESK--EKLKAWIGESALEELCRKTLCTNTVHGGIHIYVLSNDIPPHKINPL 126 (335)
T ss_dssp HHHHHHHHTTCEEEEESSG--GGEEEEEESCH--HHHHHHHCHHHHHHHHHHSCEEECTTSCEEEEEECSSCCSSCEEEE
T ss_pred HHHHHHCCCCCEEEEECCC--CCEEEEECCCC--CCHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCHHHCCCC
T ss_conf 9999749875548997288--88899989786--4224554345666317787699899991899997899882322654
Q ss_pred CCC-CCCCEEEEECCCEEEECCC-----CCCCCC
Q ss_conf 776-7663589845832895366-----888888
Q gi|254781190|r 79 EEK-IQGHLEFLAYGQQFVAYNI-----HPKTQR 106 (233)
Q Consensus 79 ~~~-~~~~iEi~~~g~q~V~~g~-----hp~Tg~ 106 (233)
... ....+||++.|+|||+||| |++|.+
T Consensus 127 ~~~~G~gviDirs~ggYVVaPGS~inh~~~~~~k 160 (335)
T 3m1m_A 127 FEENGKGIIDLQSYNSYVLGLGSCVNHLHCTTDK 160 (335)
T ss_dssp EEETTEEEEEEECTTCEEECTTCEEEGGGCCSTT
T ss_pred CCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCC
T ss_conf 2247874277854897898882020455666667