HHsearch alignment for GI: 254781193 and conserved domain: PRK06195
>PRK06195 DNA polymerase III subunit epsilon; Validated.
Probab=99.16 E-value=8e-10 Score=81.98 Aligned_cols=64 Identities=28% Similarity=0.482 Sum_probs=50.6
Q ss_pred HHHHHHHHCCCCCEEEEEEHHHHHHHHHH---HCCCCCCCCCEEEHHHHHHHHCC---CCCHHHHHHHCCCC
Q ss_conf 79999986388981999730774999998---60899884203316889998678---99968989982998
Q gi|254781193|r 54 PQVLKEALENTDVTIVAHNSYFERTVLKA---CFNLDIPIHRWICTLVLARSNGL---PSALKAVGEALKLS 119 (675)
Q Consensus 54 ~~~l~~~L~~~~~~kV~HNa~FD~~~L~~---~~Gi~i~~~~~~DTmi~A~~l~~---~~sL~~la~~l~l~ 119 (675)
T Consensus 71 ~~~~~~fi~--~~vlVaHNa~FD~~fL~~~~~r~gl~~~~~~~~cTl~LAR~~~p~l~~~kL~~La~~~gi~ 140 (309)
T PRK06195 71 WEKIKDYFN--DNLVIAHNASFDISVLRKTLELYNIPMPDFEYICTMKLAKNFYSNIPNARLNTVNNFLGYE 140 (309)
T ss_pred HHHHHHHHC--CCEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCCCCCHHHHHHHHCCC
T ss_conf 999999857--9979995628889999999998499999997774799999865577657888999985988