HHsearch alignment for GI: 254781193 and conserved domain: PRK06807

>PRK06807 DNA polymerase III subunit epsilon; Validated.
Probab=99.30  E-value=1.2e-10  Score=87.33  Aligned_cols=87  Identities=21%  Similarity=0.290  Sum_probs=63.7

Q ss_pred             HHHHHHCCCCCEEEEEEHHHHHHHHHH---HCCCCCCCCCEEEHHHHHHHHCC---CCCHHHHHHHCCCCCCHHHHHHHH
Q ss_conf             999986388981999730774999998---60899884203316889998678---999689899829981100437999
Q gi|254781193|r   56 VLKEALENTDVTIVAHNSYFERTVLKA---CFNLDIPIHRWICTLVLARSNGL---PSALKAVGEALKLSSQKMEEGKEL  129 (675)
Q Consensus        56 ~l~~~L~~~~~~kV~HNa~FD~~~L~~---~~Gi~i~~~~~~DTmi~A~~l~~---~~sL~~la~~l~l~~~k~~~~k~l  129 (675)
T Consensus        81 ~f~~Fi~--d~iLVAHNA~FD~~FL~~~L~r~gl~~~~n~~IDTL~LAR~l~P~L~NhKLnTVa~~LgI~l~--------  150 (313)
T PRK06807         81 LFLAFLH--TNVIVAHNASFDMRFLKSNVNMLGLPEPKNKVIDTVFLAKKYMKHAPNHKLETLKRMLGIRLS--------  150 (313)
T ss_pred             HHHHHCC--CCEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCCCCCHHHHHHHHCCCCC--------
T ss_conf             9998738--998999553661999999999749988899877659999986478765667899998399834--------


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf             986202112343323467858532899999989989999999963010400
Q gi|254781193|r  130 IARFCKGETHECLYDRNKPNHREAWRLFGEYCKGDVTVTREIFKRLEPLSS  180 (675)
Q Consensus       130 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~Ya~~Dv~~t~~L~~~l~~~~~  180 (675)
T Consensus       151 ----------------------------HHrAldDA~acAeI~~k~~~~~~  173 (313)
T PRK06807        151 ----------------------------SHNAFDDCITCAAVYQKCASIEE  173 (313)
T ss_pred             ----------------------------CCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             ----------------------------36717789999999999999886