HHsearch alignment for GI: 254781193 and conserved domain: PRK09145

>PRK09145 DNA polymerase III subunit epsilon; Validated.
Probab=99.06  E-value=1e-08  Score=74.78  Aligned_cols=128  Identities=16%  Similarity=0.131  Sum_probs=75.7

Q ss_pred             CEEEEEECCCCCCCCCCCCCHHHCCCCEEEEEEE-EECCEEE-----EEEECCCC---------------------H---
Q ss_conf             6899981417898700044001127981999999-9848039-----99978881---------------------0---
Q gi|254781193|r    2 ATLFIDFETRSPIDLTKCGICKYAEDVCVILFAF-GFDDHPV-----ELWDCVHD---------------------P---   51 (675)
Q Consensus         2 k~i~lD~ET~~~~dl~~~Gl~~y~~~~~i~~i~~-a~~~~~v-----~~~d~~~~---------------------~---   51 (675)
T Consensus        30 ~fVv~D~ETT--------GL~~~--~D~IieIgav~v~~~~i~~~~~f~~lV~P~~~i~~~~~~IhGIt~~~l~~ap~~~   99 (203)
T PRK09145         30 EWVALDCETT--------GLDPR--RAEIVSIAAVKIRGNRILTSERLELLVRPPQSLSAESIKIHRLRHQDLEHGLSEE   99 (203)
T ss_pred             CEEEEEEECC--------CCCCC--CCEEEEEEEEEEECCEEECCCEEEEEECCCCCCCHHHHCCCCCCHHHHCCCCCHH
T ss_conf             8999985689--------99999--9706999999999999931752899989799598645201387879981399999


Q ss_pred             HHHHHHHHHHCCCCCEEEEEEHHHHHHHHHH----HCCCCCCCCCEEEHHHHH--HHH--CC----CCCHHHHHHHCCCC
Q ss_conf             4379999986388981999730774999998----608998842033168899--986--78----99968989982998
Q gi|254781193|r   52 VMPQVLKEALENTDVTIVAHNSYFERTVLKA----CFNLDIPIHRWICTLVLA--RSN--GL----PSALKAVGEALKLS  119 (675)
Q Consensus        52 ~~~~~l~~~L~~~~~~kV~HNa~FD~~~L~~----~~Gi~i~~~~~~DTmi~A--~~l--~~----~~sL~~la~~l~l~  119 (675)
T Consensus       100 evl~~f~~fi~--~~~lVgHNa~FD~~fL~~~~~r~~g~~l~-~~~id~~~l~~~~~~~~~~~~~~~~~L~~l~~~~gi~  176 (203)
T PRK09145        100 EALRQLLAFIG--NRPLVGYYLEFDVAMLNRYVRPLLGIGLP-NPLIEVSSLYHDKKERHLPDAYIDLRFDAILKHLDLP  176 (203)
T ss_pred             HHHHHHHHHCC--CCEEEEECHHHHHHHHHHHHHHHCCCCCC-CCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCC
T ss_conf             99999998829--99899987899999999999996299999-9877609879999996676987788999999857987


Q ss_pred             CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             1100437999986202112343323467858532899999989989999999963010
Q gi|254781193|r  120 SQKMEEGKELIARFCKGETHECLYDRNKPNHREAWRLFGEYCKGDVTVTREIFKRLEP  177 (675)
Q Consensus       120 ~~k~~~~k~l~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~Ya~~Dv~~t~~L~~~l~~  177 (675)
T Consensus       177 ~~~--------------------------~H---------rAL~DA~aTa~lfl~L~k  199 (203)
T PRK09145        177 VLG--------------------------RH---------DALNDAIMTALIYLRLRK  199 (203)
T ss_pred             CCC--------------------------CC---------CHHHHHHHHHHHHHHHHC
T ss_conf             899--------------------------97---------989999999999999867