HHsearch alignment for GI: 254781193 and conserved domain: PRK09146
>PRK09146 DNA polymerase III subunit epsilon; Validated.
Probab=98.89 E-value=1.1e-07 Score=68.10 Aligned_cols=83 Identities=22% Similarity=0.149 Sum_probs=54.9
Q ss_pred HHHHHHCCCCCEEEEEEHHHHHHHHHH----HCCCCCCCCCEEEHHHHHHHHC--------------C--CCCHHHHHHH
Q ss_conf 999986388981999730774999998----6089988420331688999867--------------8--9996898998
Q gi|254781193|r 56 VLKEALENTDVTIVAHNSYFERTVLKA----CFNLDIPIHRWICTLVLARSNG--------------L--PSALKAVGEA 115 (675)
Q Consensus 56 ~l~~~L~~~~~~kV~HNa~FD~~~L~~----~~Gi~i~~~~~~DTmi~A~~l~--------------~--~~sL~~la~~ 115 (675)
T Consensus 122 ~ll~~l--~g~VLVaH~a~~D~~FL~~a~~~~~g~~l~-~P~IDTl~Le~~~~~~~~~~~~~r~~~~~~~slrL~~~r~r 198 (239)
T PRK09146 122 ELLEAL--AGKVVVVHYRRIERDFLDQALRNRIGEGIE-FPVIDTMEIEARIQRKQAGGLWNRLKGKKPESIRLADSRLR 198 (239)
T ss_pred HHHHHH--CCCEEEEECCHHHHHHHHHHHHHHHCCCCC-CCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 999981--899899968399999999999996288988-74644899999998854200444313589867638999998
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 2998110043799998620211234332346785853289999998998999999996301
Q gi|254781193|r 116 LKLSSQKMEEGKELIARFCKGETHECLYDRNKPNHREAWRLFGEYCKGDVTVTREIFKRLE 176 (675)
Q Consensus 116 l~l~~~k~~~~k~l~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~Ya~~Dv~~t~~L~~~l~ 176 (675)
T Consensus 199 YgLP~y~a--------------------------H---------~AL~DAlATAELflAQi 224 (239)
T PRK09146 199 YGLPAYPP--------------------------H---------HALTDAIATAELLQAQI 224 (239)
T ss_pred CCCCCCCC--------------------------C---------CCHHHHHHHHHHHHHHH
T ss_conf 19898887--------------------------6---------71999999999999999