HHsearch alignment for GI: 254781193 and conserved domain: PRK09182
>PRK09182 DNA polymerase III subunit epsilon; Validated.
Probab=98.02 E-value=1.7e-05 Score=53.99 Aligned_cols=60 Identities=18% Similarity=0.285 Sum_probs=37.5
Q ss_pred HHHHHHCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCEEEHHHHHHH--HC-CCCCHHHHHHHCC
Q ss_conf 99998638898199973077499999860899884203316889998--67-8999689899829
Q gi|254781193|r 56 VLKEALENTDVTIVAHNSYFERTVLKACFNLDIPIHRWICTLVLARS--NG-LPSALKAVGEALK 117 (675)
Q Consensus 56 ~l~~~L~~~~~~kV~HNa~FD~~~L~~~~Gi~i~~~~~~DTmi~A~~--l~-~~~sL~~la~~l~ 117 (675)
T Consensus 113 ~V~~~~~~-adliiAHNA~FDR~F~E~~~p~-f~~k~WaCS~~~IdW~~~Gf~s~kLeyL~~~~G 175 (293)
T PRK09182 113 EVDALIAP-ADLIIAHNAGFDRPFLERFSPV-FANKPWACSVSEIDWSARGFEGTKLGYLAGQAG 175 (293)
T ss_pred HHHHHHCC-CCEEEECCCCCCHHHHHHHCCC-CCCCCEEEECCCCCHHHCCCCCCCHHHHHHHCC
T ss_conf 99998644-9899981775467789850953-258750531637970322877415999998609